Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa03g3457 | ATGTGGATCGATCCAATATGGTGTGAGACCAGTTTGAGTGAGACCAGTTTGACGTTCATATCCGTCTGTATTATGTTACAAGGTGAAGTATCAAAGAAGGAATCACTTATGGAGGAATCCTTTCTTCAGAATCCTTCAGAAATGGTTAGTAATGAAAGAGATGAAATCAAAGGCCACCTAGAAGAACTTGATGATGAAGCTGAGGATGAAGAAGAGGAATCAAGTGAGGAACTAGAAGATGATCCAGAAGAGAATTCTGTTCAAGAAGTGGAGCAGAAGCAGCTAGAAGAAACAACTCTTGACCCAGGACTCTACAAGAAATTGAGGGAAGTGCCATGTTATGAAGTTCCAGATAGCAATCAGTTGTCACTTTATTATTGGAAAGATGACCAGTCTGGAGAACCATTCGAGGATCTATCTGAAGTATCTTTGTTGAAGCAAAGTTCTGGGTGGAATGAACTAGACAAAAACGATGATGGCGGGCTAAATGAAGAAGCGGAACAAAAGCAGCTAAAAGAAACAATTCTGGATCCAGAACTGGATACAAAATTTGGGGAAGCATCAGTTAATGAGGGTCCAGTATGCTCTCCAGAGTCATTTTATAAATACAACCATGGTCAGACTCAAGAATTATTTGATGAGCTATCAGAAGTGTCAGTTTCATTTAAAACTTCTGACCGTGATTGTGGTAAGTGTGACCACAAATCAGGACCAGTCAAACAATCAAATGATAAGAAGAGGTGTCAGGATGTTGCATCTGGTACATCGACTCCAGTGCCATGTTATCAGTCACAGAAGAAGTGCAAACAGGGGGGATCTTTAGGTCCAAAAGCAGAATCAGTGCCTTCGGGTCTGGAGCTCAATAATGACTCTGTGACTGCTGGGGCACCTATTGATAAATCTGCTTCTAAAGAAGGTGGTACGGGAAGTTCTGGAAAACGAAGGCACAACAGATGGGAACAACAGCCTGACGGTGATCAGATAAAAGATTATCAGATTTGCAAAAGGAGGAAAACCAGATGGTCCAGTGATAACACTCAGATAAAAATGATGGGCCCACTTCAGCTGCCCGACATCACAAAAGACTTTCTTGTGGAATATGAGAAGGATCCAGAATTTCAGGGGCTGAAAGCTGAGCTTCTTGAGATTAATAGACAACTGCAAAGACCTCTTAATGATGATAGGCCTGAGGAGGAAAGATCTCCTTCCCCAGAACCAATTTATAATGACCTTGGCATCAGAATAAATACACGGGAAATAAGATTCTGTCAGAAACTTGTGCAGAAACGTCAAAATATCATCTCAAAGTTTATCAAATCAAACCCAACTTTCAAACCTCCATCTGATTACAAGCCTCCAAAGCTCTTCAAAAAACTTTACCTACCAGTGAAACAATATCCAGAGTACAATTTTGTTGGCCTTATAATTGGCCCTCGAGGAAACACTCAGAAGAGAATGGAAAATGAAACCGGGGCTAAGATTCTTTTAAGAGGTAAAGGCTTCTCTAAAACACCCAGCAAATCTTCCTCTGGTAAAGAAGATTTACATGTATATATAGAAGCAGACAATAAAAAATCACTGGATGCAGCAGTTGTTATGGTTGAGAAACTGCTGATTCCAATTGAAGGAAGAAATGAGCACAAGAAGGCTCAATTAAAAGAGCTGGCCATGCTGAATGGAACAGTTGATGAAAATTTGTGCAGTTTTAACAGTGATGAGGGACACTGGCCTTATGCCTGCCCTAGCCTTGGATCAACTATCAAAATGAACTCATGTGACACTTGTGGTCTCAACAGTCATTTAAAACTTGCCTGTCCCTCTACACTATCTACACAGAACGATTCTGTGCTCAGTTCTGGATTTGGCTTTAGTCTCAGTTCAACACAGAATAGACAAAAGAGGCCTGAAAAGAAAGCAGTGATGAATAATCTTTATGTTGGTAATCTGCCTCAAGCAATTGATGGTAATAGATTGTGTGAGCTGTTTTCTCCATTTGGTAAGATCACTGAAGCAAAAATTATTAAGGATCGAGCCACTGGAAGCAGTAGAGGTTATGGCTTTGTCAAGTTTGAGAATGCCATGGATGCAGCAGCAGCTGTAATTCATTTGAACGGTTTGAAATTGGATGGGAGGGTTTTGAAAGTAAGCATAGCTGGGCTCCTGTCGCATACTGAATCCCTAGACTTGAACGTGCTCCCAAAGCACTCATGGCTTACTGGCACATCTGAAAATATCCCAAGTCGAACAGATTGCTCTGGTCCATTACATTTTATGCTGCCATCACATCAAACTTCACTTCATGACTGCAGCGGCATGAATATGTTTTCATCCATTATCAACTCACGGTATGGCGGTCTTAAGAAGGATCTAGGCTTTACTCCTCCAAGCTACACCTCAAGCCCATCTGATTTTGGTAATTCTAGTAATATGCATTTCTCATGCAACTTTACAGATCAAAGTTTGTTCTCATCAGGTTTTGGGGAGAATCAGGTCGACCCCAGCTGCCTCGATAAATCTTTTGTATGTTTTCATTACAAAACCTTTGTAGGTAATTGA | 2556 | 0.4085 | MWIDPIWCETSLSETSLTFISVCIMLQGEVSKKESLMEESFLQNPSEMVSNERDEIKGHLEELDDEAEDEEEESSEELEDDPEENSVQEVEQKQLEETTLDPGLYKKLREVPCYEVPDSNQLSLYYWKDDQSGEPFEDLSEVSLLKQSSGWNELDKNDDGGLNEEAEQKQLKETILDPELDTKFGEASVNEGPVCSPESFYKYNHGQTQELFDELSEVSVSFKTSDRDCGKCDHKSGPVKQSNDKKRCQDVASGTSTPVPCYQSQKKCKQGGSLGPKAESVPSGLELNNDSVTAGAPIDKSASKEGGTGSSGKRRHNRWEQQPDGDQIKDYQICKRRKTRWSSDNTQIKMMGPLQLPDITKDFLVEYEKDPEFQGLKAELLEINRQLQRPLNDDRPEEERSPSPEPIYNDLGIRINTREIRFCQKLVQKRQNIISKFIKSNPTFKPPSDYKPPKLFKKLYLPVKQYPEYNFVGLIIGPRGNTQKRMENETGAKILLRGKGFSKTPSKSSSGKEDLHVYIEADNKKSLDAAVVMVEKLLIPIEGRNEHKKAQLKELAMLNGTVDENLCSFNSDEGHWPYACPSLGSTIKMNSCDTCGLNSHLKLACPSTLSTQNDSVLSSGFGFSLSSTQNRQKRPEKKAVMNNLYVGNLPQAIDGNRLCELFSPFGKITEAKIIKDRATGSSRGYGFVKFENAMDAAAAVIHLNGLKLDGRVLKVSIAGLLSHTESLDLNVLPKHSWLTGTSENIPSRTDCSGPLHFMLPSHQTSLHDCSGMNMFSSIINSRYGGLKKDLGFTPPSYTSSPSDFGNSSNMHFSCNFTDQSLFSSGFGENQVDPSCLDKSFVCFHYKTFVGN | 851 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa03g3457 | 851 | Gene3D | - | 613 | 720 | IPR012677 | - | |
Bisa03g3457 | 851 | CDD | KH-I_BBP | 454 | 539 | - | - | |
Bisa03g3457 | 851 | MobiDBLite | consensus disorder prediction | 388 | 404 | - | - | |
Bisa03g3457 | 851 | Pfam | KH domain | 470 | 535 | IPR004088 | GO:0003723 | |
Bisa03g3457 | 851 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 644 | 714 | IPR000504 | GO:0003723 | |
Bisa03g3457 | 851 | SUPERFAMILY | RNA-binding domain, RBD | 641 | 718 | IPR035979 | GO:0003676 | |
Bisa03g3457 | 851 | ProSiteProfiles | Type-1 KH domain profile. | 470 | 534 | - | - | |
Bisa03g3457 | 851 | MobiDBLite | consensus disorder prediction | 224 | 336 | - | - | |
Bisa03g3457 | 851 | PANTHER | RNA-BINDING PROTEIN RELATED | 299 | 706 | IPR045071 | - | |
Bisa03g3457 | 851 | Coils | Coil | 49 | 80 | - | - | |
Bisa03g3457 | 851 | MobiDBLite | consensus disorder prediction | 61 | 86 | - | - | |
Bisa03g3457 | 851 | FunFam | Sex lethal, isoform D | 624 | 719 | - | - | |
Bisa03g3457 | 851 | Gene3D | - | 368 | 447 | IPR047086 | - | |
Bisa03g3457 | 851 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 642 | 720 | IPR000504 | GO:0003723 | |
Bisa03g3457 | 851 | Pfam | Splicing factor 1 helix-hairpin domain | 337 | 451 | IPR032570 | - | |
Bisa03g3457 | 851 | MobiDBLite | consensus disorder prediction | 42 | 101 | - | - | |
Bisa03g3457 | 851 | SMART | rrm1_1 | 643 | 716 | IPR000504 | GO:0003723 | |
Bisa03g3457 | 851 | MobiDBLite | consensus disorder prediction | 224 | 247 | - | - | |
Bisa03g3457 | 851 | MobiDBLite | consensus disorder prediction | 309 | 336 | - | - | |
Bisa03g3457 | 851 | Gene3D | K Homology domain, type 1 | 452 | 566 | IPR036612 | GO:0003723 | |
Bisa03g3457 | 851 | SUPERFAMILY | Eukaryotic type KH-domain (KH-domain type I) | 455 | 562 | IPR036612 | GO:0003723 | |
Bisa03g3457 | 851 | SMART | rrm2_1 | 643 | 716 | IPR003954 | GO:0003676 | |
Bisa03g3457 | 851 | MobiDBLite | consensus disorder prediction | 87 | 101 | - | - | |
Bisa03g3457 | 851 | SMART | kh_6 | 455 | 539 | IPR004087 | GO:0003676 | |
Bisa03g3457 | 851 | MobiDBLite | consensus disorder prediction | 387 | 409 | - | - | |
Bisa03g3457 | 851 | MobiDBLite | consensus disorder prediction | 248 | 270 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa03g3457 | Bisa-ChrBisa03 | 68188485 | 68191972 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa03g3457 | 642 | 718 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 41.558 | 2.15e-10 | 62.4 |