Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3452 ATGGCCTCTCCAATTCTCCTCCCTTTTGCTCCCACTCGCTACAGTACTCTCAAACCAACACTCTCCCTCTCCTCCCTTTCACCTCTTCTGCAACAATTACATCCTCTTCCCCCATATCCTCTCCACCCGCGTTTCACACTCCGTTGTAGGTCTCTATCAAAGACAATTACAATCCCACTTGCCTATGTGACCGGACCCGCATCCGATCCCATTTTCAGTGAGTCCGATCCTAAGATAGATGAGTCGAATCCTTGGCCGGAGAAAGTCCAGCCATCGAGCGTGATTAGCTGGGAATTTATATGGATGCTTTTGATGAAACACAAATTGCGGCTTGCCGTTTCGGCTGTAACTCTTTTGTGTTGCACCAGTTGTACTCTATCTATGCCCATATTATCTGGTCAATTTTTTGAAGTTCTAATTGGTGCTAGACAAGATCCATTATGGAGGCTGCTCAGCAAGGTTGGAATTCTGTATGCCCTGGAGCCAATTCTAACCGTTATTTTTGTTATAAACATGAACATAGTGTGGGAGAAGGTTATGTCGACACTTAGAACTCAGATCTTTGGAAGGATATTAATTCAGAAGGTGGAATTTTTTGACAGATACAAGGTTGGGGAACTCACTGGTTTGTTAACATCTGATTTGGGTTCTCTTAAAGATATTTTAAGTGACAATGTTTCAAGGGATCGTGGATTCAGGGCATTATCTGAGGCAAGCATTTCTACACCAGTCAGAAGTCATTGGGACAATATTCATACTTTTTGCTTTATCACCTCAACTTGCTCCAATTCTGGGCATTCTGATGCTTGCAATTTCTGTTTCAGTCGCCCTGACAAATCTGTAGATCAAGGCAGAACTATCTACAAGAGATCAACTTTGCCGGTTTTTAAAGCACATGGAATGGTTCAAGCATCCATATCTGACTCTGTAGCAGAAACATTTTCTGCTATTCGCACAGTAAGATCATTTGGTGGTGAGAAACGCCAAATGTTTTCATTTGCAAACCAGGTTCTTTCTTACCAATCAAGTGGGATAAAGCTGGGGACTTTTAAATCTGTAAATGAATCCTTGACTAGAGTTGCCATTTATATTTCTTTACTGGCATTATATATCCTTGGAGGAAGCAAAGTCAAAGCGGGTAAGCTTTCTGTTGGAACTATGGCATCTTTTATTGGATACACTTTCACATTGACTTTCGCCGTTCAAGGACTGGTCAATACTATTGGAGATCTTCGTGGAGCCTTAGCTGCTGTTGAGAGGATAAACTCTGTTTTCTCAGGGGTTCAAATTGATGAAGCCCTTGCTTCCGGCTTAGAAAGAGAACTGAAACAGAAGCAATTGGATGATGATAACTTTAAACTGTTCTTCTCTGATAGTTCTGCTGAGAAAAACCAAAATAAATACTTGCATTACATGTCAGCACTGAAATTGTCAAGCAATTTGTTTAGTTTAGCTTGGTCTGGAGATGTTGTTCTTGAAGATGTGTATTTCTCTTATCCTTCAAGGCCAGATGTGGAAATCTTGAGTGGCTTAAATTTAACACTAAAATGTGGAACTGTAACTGCATTGGTCGGTCCTAGTGGTGCAGGCAAAAGTACAATAGTTCAGCTATTGGCTCGTTTTTACGAGCCAGCAAGAGGTCGTATAACTGTTGCAGGAGAGGATGTCCGAACATTTGACAAGAGTGAATGGGCCAGGGTTGTCTCTATTGTAAACCAAGAGCCCGTTCTATTTTCAGTGTCTGTTGGAGAAAATATTGCATATGGGCTTCCGGATGATTCTGTTTCTAGAGAAGATGTGATTAACGCAGCAAAGGCTGCTAATGCCCATGATTTCATCATTTCACTTCCACAGTGCTATGACACACCTGTTGGTGAGCGTGGGAGCCTACTAAGTGGGGGACAGAGGCAGAGAATTGCTATTGCACGAGCTCTCTTAAAGAATGCCCCAGTCCTTATACTTGATGAGGCTACCAGTGCCCTAGATGCAGTTAGTGAGCGCTTGGTCCAGGATGCCCTCAACCATTTGATGAAGGGGAGGACAACGTTAGTAATAGCTCACCGATTGAGCACAGTTCAAAATGCCCATCAAATTGCACTCTGCTCTGATGGGAAGATTGCAGAACTTGGCACGCACACTGAGTTAGTGGCTAAGAATGGACAATACGCTTCTCTGGTTGGCGCTCAAAGGCTTGCATTTGAATGA 2205 0.4272 MASPILLPFAPTRYSTLKPTLSLSSLSPLLQQLHPLPPYPLHPRFTLRCRSLSKTITIPLAYVTGPASDPIFSESDPKIDESNPWPEKVQPSSVISWEFIWMLLMKHKLRLAVSAVTLLCCTSCTLSMPILSGQFFEVLIGARQDPLWRLLSKVGILYALEPILTVIFVINMNIVWEKVMSTLRTQIFGRILIQKVEFFDRYKVGELTGLLTSDLGSLKDILSDNVSRDRGFRALSEASISTPVRSHWDNIHTFCFITSTCSNSGHSDACNFCFSRPDKSVDQGRTIYKRSTLPVFKAHGMVQASISDSVAETFSAIRTVRSFGGEKRQMFSFANQVLSYQSSGIKLGTFKSVNESLTRVAIYISLLALYILGGSKVKAGKLSVGTMASFIGYTFTLTFAVQGLVNTIGDLRGALAAVERINSVFSGVQIDEALASGLERELKQKQLDDDNFKLFFSDSSAEKNQNKYLHYMSALKLSSNLFSLAWSGDVVLEDVYFSYPSRPDVEILSGLNLTLKCGTVTALVGPSGAGKSTIVQLLARFYEPARGRITVAGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDDSVSREDVINAAKAANAHDFIISLPQCYDTPVGERGSLLSGGQRQRIAIARALLKNAPVLILDEATSALDAVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAHQIALCSDGKIAELGTHTELVAKNGQYASLVGAQRLAFE 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3452 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 483 729 IPR027417 -
Bisa03g3452 734 Pfam ABC transporter transmembrane region 304 400 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g3452 734 Pfam ABC transporter transmembrane region 113 227 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g3452 734 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 73 732 IPR039421 -
Bisa03g3452 734 Gene3D - 488 731 IPR027417 -
Bisa03g3452 734 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 112 413 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g3452 734 ProSitePatterns ABC transporters family signature. 631 645 IPR017871 GO:0005524|GO:0016887
Bisa03g3452 734 SMART AAA_5 517 711 IPR003593 GO:0016887
Bisa03g3452 734 SUPERFAMILY ABC transporter transmembrane region 288 425 IPR036640 GO:0005524|GO:0016020
Bisa03g3452 734 CDD ABC_MTABC3_MDL1_MDL2 490 729 - -
Bisa03g3452 734 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 490 728 IPR003439 GO:0005524
Bisa03g3452 734 Pfam ABC transporter 508 659 IPR003439 GO:0005524
Bisa03g3452 734 Gene3D ABC transporter type 1, transmembrane domain 285 445 IPR036640 GO:0005524|GO:0016020
Bisa03g3452 734 SUPERFAMILY ABC transporter transmembrane region 100 226 IPR036640 GO:0005524|GO:0016020
Bisa03g3452 734 Gene3D ABC transporter type 1, transmembrane domain 86 228 IPR036640 GO:0005524|GO:0016020
Bisa03g3452 734 FunFam ATP-binding cassette sub-family B member 8, mitochondrial 488 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3452 Bisa-ChrBisa03 68042424 68047910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3452 303 734 Calmodulin-binding Proteins AT2G36910 39.955 5.47e-75 262