Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3436 ATGGAGGATGCAACACTCACTGGACTGCTAAACGGGGTCTTCGGAAAATTCCCCACTCGCCGAGCCATATCTGTTACCGGAAGGTTCGATCTCACTTACTCTTCCCTTCACAACCTCATCGAACGCGCCGCTTCTCGCTTACTTTGTGCCGGAATCAACGCCGGCGATGTTGTGGCCCTCACCTTCCCCAACACTGTCGAGTTTGTTATAATGTTCTTGGCCGTAATTCGAGCACGAGCCACCGCTGCGCCGCTGAACCCAGCCTACACGGCTGAAGAGTTCGAGTTCTATTTATCTGATTCCGAATCGAAGCTCTTATTAACGTCCCAAGAAGGAAACAAGCCGGCTCAAACTGCGGCTTCTAAGCTGAACATCCCCCACGGCACGGCTTCGCTTACCAAAAACGACGACGCTGAGGCTGAGCTCAATCTCTTGCTCAGTCAATACGAGTCAAACGTTAATTCAGTTAGCGAACTCGTCAATGACCCGTCCGACGTGGCACTCTTCCTCCACACTTCAGGCACCACCAGCCGCCCCAAGGGAGTGCCGCTGACTCAGCTCAACTTAGCCGCTTCCGTGAAGAACATAAAGTCCGTGTACAAACTCACTGAGTCTGACTCGACCATGGTCGTTCTTCCACTGTTCCACGTTCACGGACTCATGACCTCGTTACTGAGTTCATTCGGAGCCGGTGCCGCGGTGGCGCTCCCGGCGGCGGGTCGTTTCTCGGCTTCAACATTCTGGTCAGACATGGTGAAGTACGACGCCACGTGGTACACGGCGGTTCCTACGATACATCAGATCTTGTTGGATCGCCACCTCAGCAACCCGGAACCCGTTTGTCCGAAACTCCGGTTTATTCGGAGCTGTAGCGCGTCGCTCGCACCGGCCATATTGGCAAGGATGGAGGCGGAATTTGGAGCACCGGTTTTGGAGGCGTATGCGATGACGGAAGCCACACATCTTATGTCGTCAAATCCGTTGCCTGAGGATGGACCACACAAGCCCGGATCGGTGGGGAAACCCGTGGGTCAAGAAATGGCTATATTGAATGAGAATGGTGAAGTCCAAATGGCTGAAGTAAATGGAGAGGTTTGCATTAGGGGGCTGAATGTGACGAATGGGTACAAAAATAACCCAGAAGCCAACAACGCAGCGTTTCGAGTTGGTTGGTTTCATACGGGTGATCTTGGCTATTTTGATTCAGATGGGTATTTGCATCTCGTGGGTCGGATCAAGGAGCTCATTAATCGCGGAGGGGAGAAAATATCACCGATTGAAGTGGAAGCTGTCCTTTTATCTCACCCAGACGTTGTTCAAGCAGTTGCTTTCGGAGTAGCAGATGTCAAATATGGAGAAGAGATAAACTGTGCAATAATCCCCAAAGAAGGATCAAAGGTTCATGATGAAGAGGTCCTAAGGTTTTGCAAGAAGAATCTTGCAGCCTTCAAAGTGCCCAAAAAAGTCTACTTCACTGATTCTCTGCCCAAGACCGCCACTGGCAAAATTCTAAGACGTCTTGTAGCAGAGGAATTTTCCCAAATTTTATCTGCTTAA 1557 0.5087 MEDATLTGLLNGVFGKFPTRRAISVTGRFDLTYSSLHNLIERAASRLLCAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNPAYTAEEFEFYLSDSESKLLLTSQEGNKPAQTAASKLNIPHGTASLTKNDDAEAELNLLLSQYESNVNSVSELVNDPSDVALFLHTSGTTSRPKGVPLTQLNLAASVKNIKSVYKLTESDSTMVVLPLFHVHGLMTSLLSSFGAGAAVALPAAGRFSASTFWSDMVKYDATWYTAVPTIHQILLDRHLSNPEPVCPKLRFIRSCSASLAPAILARMEAEFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGKPVGQEMAILNENGEVQMAEVNGEVCIRGLNVTNGYKNNPEANNAAFRVGWFHTGDLGYFDSDGYLHLVGRIKELINRGGEKISPIEVEAVLLSHPDVVQAVAFGVADVKYGEEINCAIIPKEGSKVHDEEVLRFCKKNLAAFKVPKKVYFTDSLPKTATGKILRRLVAEEFSQILSA 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3436 518 ProSitePatterns Putative AMP-binding domain signature. 169 180 IPR020845 -
Bisa03g3436 518 FunFam Peroxisomal-coenzyme A synthetase 5 411 - -
Bisa03g3436 518 FunFam 4-coumarate--CoA ligase 2 414 515 - -
Bisa03g3436 518 Pfam AMP-binding enzyme C-terminal domain 427 502 IPR025110 -
Bisa03g3436 518 SUPERFAMILY Acetyl-CoA synthetase-like 5 513 - -
Bisa03g3436 518 Gene3D - 8 411 IPR042099 -
Bisa03g3436 518 PANTHER ACYL-COA SYNTHETASE 5 512 - -
Bisa03g3436 518 Pfam AMP-binding enzyme 16 418 IPR000873 -
Bisa03g3436 518 CDD FACL_fum10p_like 18 510 IPR045310 GO:0016874
Bisa03g3436 518 Gene3D - 412 515 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3436 Bisa-ChrBisa03 67495324 67498346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3436 17 511 Monolignol Biosynthesis Gene Families AT4G05160 31.579 2.43e-60 206