Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3427 ATGTCCCCTTTTTCTCATTTGAACTTAGCAGCAACATCTCCATCTTTTCCAAGAAGTCCAGGAAGGGCTGATAACATAATGGGCCCTGGCTCACGTTGGAAAAAAGGAAAGCTTCTAGGAAGAGGCACATTTGGACATGTGTATGTTGGCTTCAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTAACACTTTTTTCAGATGATGCCAAGTCTAAGGAAAGTGCTAAGCAATTGATACAGGAAATTGCTCTATTAAGTCGTTTACAGCATCCAAATATTGTGCAGTATTATGGTTCTGAAACAGGGGATGACAAGCTTTACATATACCTGGAGTATGTATCTGGTGGCTCCATATATAAACTTCTTCAAGAATATGGGCAATTTGGTGAATTAGCTATCTATAATAACTGGGCAATCATGTCTGTTCCTTATTGGATGGCTCCTGAGGTTATAAAGAACTCTAATGGTTGCAACCTTGTTGTGGATATCTGGAGTCTTGGGTGCACAGTTTTGGAAATGGCTACAACTAAGCCTCCTTGGAGTCAGTATGAAGGGGTTGTGGCCATGTTCAAGATTGTGTCCATTGTGCATTCTTGCTTTTTGTATCAAATATCCCGCTGGGTTATTTATACTCATAATAACATGAATAGGAACTTATCTGCTTTGCTTCATGAAAATATATATCAAATGGAATTTGCTGCACTTCTTGCTTTGGCATTCCTTATGGTTGATGAATTAGGAATTGGACACGGACGAAACCTTTGTAACTTGGATTCGGATAAGCTCTCGGTCCATTCTTCTAGAGTTTTGAAAACTAATCCTCATTCTGGTGCATCCACACCCCTCACCAGTGGTAGTGGTGCCATCCCCTTTATTAATCACCTGAAACAGTCAGTTTGCTTTCAAGAGGGTTTCAGAAGCTTGCCAAAGCCCTCAAATGGAATCTACATCAATGGATCTGCTCATCATGACTCAAATGTTGACATCCTTCGAGGAATGCAATTGGGGTCTCACATTTCATCAGAATTAGTTCCCAGTGAAAATGATTTTCTGGGTAAGCATTTTGCATGGTCTCCTCTTGGTGAGTTATGTGATGCTCAATCAGTGTTGTCTGATTGTGTTTCCCAGCAGCTGCGGGGGGATCATGGAAATGTTCAGATTGGCGCATTGCTGAATCTAAGTCCCAACTCTTTGTTCAATTGA 1209 0.4094 MSPFSHLNLAATSPSFPRSPGRADNIMGPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLIQEIALLSRLQHPNIVQYYGSETGDDKLYIYLEYVSGGSIYKLLQEYGQFGELAIYNNWAIMSVPYWMAPEVIKNSNGCNLVVDIWSLGCTVLEMATTKPPWSQYEGVVAMFKIVSIVHSCFLYQISRWVIYTHNNMNRNLSALLHENIYQMEFAALLALAFLMVDELGIGHGRNLCNLDSDKLSVHSSRVLKTNPHSGASTPLTSGSGAIPFINHLKQSVCFQEGFRSLPKPSNGIYINGSAHHDSNVDILRGMQLGSHISSELVPSENDFLGKHFAWSPLGELCDAQSVLSDCVSQQLRGDHGNVQIGALLNLSPNSLFN 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3427 402 Gene3D Transferase(Phosphotransferase) domain 1 133 235 - -
Bisa03g3427 402 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
Bisa03g3427 402 ProSiteProfiles Protein kinase domain profile. 33 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3427 402 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 145 195 - -
Bisa03g3427 402 Pfam Protein kinase domain 144 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3427 402 Pfam Protein kinase domain 34 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3427 402 SUPERFAMILY Protein kinase-like (PK-like) 31 200 IPR011009 -
Bisa03g3427 402 Gene3D Phosphorylase Kinase; domain 1 29 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3427 Bisa-ChrBisa03 66831866 66843095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3427 3 384 MAP Kinase Kinase Kinase AT1G63700 40.557 5.66e-87 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa03g3427 Pkinase 1.2e-19 CL0016