Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3423 ATGGCCGAAGACTGGGACCTGTACGCCGTCGTGCGAGGCTGCAGATCTGCCACCTCTGCAGCCGGAATTTCAACCACCGCCACCATCAGTAGAGCTACTACGTTTTCCCGACACACTTGTTTGTCTAGCTTGGCCACTTCACCATTCAAGGAAGAAAATGACCCTTTCGCTTTTCCCAGTCCTATACAACCCAGAAGCAATGGGTTCAAAGAGCTACACCAATTGTTCATACCCTCTATCCCCACCACTACCACTACTAATGGTTGTAGCATCTATCCTAATTCCCCTTTTCCTGGTTTTTCTGATGCAGCAGGGTCCATTAATCCTGCACTTCCTGGGTCCAATATTAGGCCTCATTTTGTGCTAGAAGCCTCCACTTGTGGTTTTGAAAGATTCCATGACCACCACGAACAGCAAACCCAACAACAACAGCAGCAGCAAAAGCATATTCAAAATCAACTACAAAAAGAGCCAACAGAAGAGAATGACTCTGACTCTCATGATGTTTGGCACTATATATATCCCAGGAATTATTACAGATGCAGCAGCTCAAAAGGCTGTTCGGCCCGTAAACAAGTAGAACGGAGCAACACTGATCCAGACAAGTTCATCGTCACGTACACCGGAGACCACACGCATCCCCGACCCACCCACCGGAACACGCTTGCGGGTAGTACCCGGAACAAACCGTCCACGACCCATCAACCCACCATTCATGAATCCGGGTCGCCCGGCAATATTGCCAGTACTGCGTCGTCGTCGTCATTCTTGCCTCTCTCCCCCAGAACGCCATTGACAGCGAAGACACCAAACGAGGAGTGTGCCGATGGCCCCATGCTAAGCAATGAAGCCGTAAGCACCGACCCGGATAATGAGCCGGACATCGCATCTGAATCTGAAGATGACATTTTAATACCCAATATGGCGGCCGTGATGGAGAACATCTTCCTCGGCGCTCACCACTTCAGGGGTGGAAGCGGTAGTAGTGGCGGCAGTGGCGATAGCCGGAGCGACAATATGGCTGATGGATCGTCTCCAAATAGTCAACCCAGGTTGACTCCGGCTTCAAAGAACCAAATCTCTCATTTGAGTCGGTCCAGTCCTGGTTGA 1110 0.5063 MAEDWDLYAVVRGCRSATSAAGISTTATISRATTFSRHTCLSSLATSPFKEENDPFAFPSPIQPRSNGFKELHQLFIPSIPTTTTTNGCSIYPNSPFPGFSDAAGSINPALPGSNIRPHFVLEASTCGFERFHDHHEQQTQQQQQQQKHIQNQLQKEPTEENDSDSHDVWHYIYPRNYYRCSSSKGCSARKQVERSNTDPDKFIVTYTGDHTHPRPTHRNTLAGSTRNKPSTTHQPTIHESGSPGNIASTASSSSFLPLSPRTPLTAKTPNEECADGPMLSNEAVSTDPDNEPDIASESEDDILIPNMAAVMENIFLGAHHFRGGSGSSGGSGDSRSDNMADGSSPNSQPRLTPASKNQISHLSRSSPG 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3423 369 ProSiteProfiles WRKY domain profile. 174 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g3423 369 SMART WRKY_cls 163 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g3423 369 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 174 299 IPR044810 GO:0003700
Bisa03g3423 369 Gene3D WRKY domain 134 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa03g3423 369 Pfam WRKY DNA -binding domain 174 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g3423 369 SUPERFAMILY WRKY DNA-binding domain 169 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa03g3423 369 MobiDBLite consensus disorder prediction 205 297 - -
Bisa03g3423 369 MobiDBLite consensus disorder prediction 134 166 - -
Bisa03g3423 369 MobiDBLite consensus disorder prediction 139 153 - -
Bisa03g3423 369 MobiDBLite consensus disorder prediction 325 369 - -
Bisa03g3423 369 MobiDBLite consensus disorder prediction 328 369 - -
Bisa03g3423 369 MobiDBLite consensus disorder prediction 218 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3423 Bisa-ChrBisa03 66613259 66614795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3423 1 333 WRKY Transcription Factor Family AT4G01250 32.853 1.99e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa03g3423 WRKY 1.8e-14 CL0274