Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3417 ATGATGATAGTCGTAATAGGAGTAATGGGAATCAGGTTGCAAGGAAGAAGCATCAGCTCTATCTCTATCAAGTTCTTGATTTCCAATACGCAAATTCTAACCCATTTGGTTTTGCTTTTGGGGTTTTTGCTTTCAATGGTTATCTTAATGTTAATTGGATCTAGAGTTGATGATGAGCAACATGATGCTCTAATTTACATCTTTAAGACTCATGCAGTTATGATAGTTGCCAAACTTAAAGCCTCTAGTACTCCAGATGTCATGAAAACAGAGGTAGGAAATGATTCCTTAGATACCATAATCAGACAAGCAATTGCCAAAGAACCTTTCCTTTCTTTTTCAAGGGCTGGTGACAGCCCTGTGCAGTGGATTCAATTACTTCATGCTCTAGATCAGCAAGAACTCCCAGGTTGGCCTATGCTTACCCCTCTAAAGGTTCAATTACAGAAGTGTGACAAGTGTTCCCGAGAATTTTGCTCTCCAATTAATTATAGAAGACATATTCGTGTGCAACATCGGTTAAAAAAGCTTGATAAGGATTCCACCAACAACAGATATCTATTAGGAGCATATTGGGATAAGCTCTCACTAGAAGAGGCAAAGGAAGTTATATCATTCAAGAATGTGATGCTGGAGGAAGTCCCAGGGTCTTCAATTTTACAAGCACTGACAACCCTTATTCGAAAACAAGGATTTTGTTCACTCCCGCAGTATTATCTGAAGGCTGGTTCTGCTCTTTTGGATATTGTTCAAGCTAGATACAGTTTTCCTATATCTTCTCAGGAGTTGTTCAGTGTACTTGATGATGCTAGTGAAAAAACATTTTTATGTGGGACTGCAGTGTCAATGCAGAAGTATGTTTTTGATGGAGAAGCTGGAAAGATTGGTCTTGAACCAAAAAACCTACTTGCTTGCACAAGTTTCATGCTAGAGCAGATATTGGTGAAAGCATGGCTTGCTGACAAGGATGCAGAAGCATTAAGGTACCAGAAACTACTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAGGAAACGTCAGAAAAAGCTTAGACAAAAGGAGCAGAAGGCGAGAGAGCACAGGCATGAGGATGAGGCAGAAATTAAAGAGAACATCAGCAGCACAGTAGAATCTGTATCCCAAGCAGAGGCATCTTTGGATACATTTGACTTCGAAGAACATGATCCAAATACTGTTTCTGATCATGTTCCTTCACGACTTGTACCATTCCAATGCCCAGATACCGATGAAGGTTCAGACGAGTATTCTAAGTCAAGCCATGATTGTGGCAGTGATCAGAACATTGAGCAACAGACAGCTCAAGGACATAACCATAGACGTGTAGTGATTGCACAGTGGCAGGCACTGCCAAAATCACAATTGGCTGTAGCCAATGGTCTCCATGCAAGCCAGAATTCTCAAGTTCCAAAGCTCCGAGTCATTAAGAAGTATGGCACCTACCATGATCAAAGGATAGCTCCTACAGTTACTGGTAATAAAGTATGGAGTCGAAAGACTAAACCAGAAATTGATATAATGCCAAAAGCAAGGTTAGAGAGAGAATCAAATGAAGTTAAAAACCATGAAGTTTTGATAGGGTCTATATCTGTTGCTCTTGACAATTGCAGACAGTCAAAAAGTAGTTTGGTGACATCTTGGGAGGGCTGCATGGTTGAGAATCTGGCCAAGGAGAGTAGTTCTCAAGAGAAGCCAGCTGTCCAGCATAGCAACAATCGAATGGCAGTTAAGCTTTGGAGACCTGTTAGCCGGGGTGGACTGAAAGATATTATGCCAATCCAAAATTGTAGTAGAGAAGATTATTTGGATGCAATTAATAAAACGGGAGATGATCAAAACTTGTCAGATGATAGGTGTTTAAGGTTCTGTGACATAGATAATAGTAATAGTGTCTTCGAGAACAATTTCTCCGTTCCAGAGGACCATGTAGCTTCAGGAAGCCTGGGATTATCCAGCAATGCTGCAAAAGCCTTTCTGGCGCAAAGATGGAAAGAAGCTATTTCATTAAATCATGTGAAATTGGTTCTTTCACTTGACTCCGAACCTCCAGGGTATCAGGAAATAAAAAATTGCGAATTAAGAACATGTCAATCTTCAAACGTTGTCAGTCACACCATTCCTTTGACTGCGGAGAACCAGTTGTCTGCAACCTCCGAAGCTGCTAAAGTCAAACTCAGAATGAAGCCTGAAAGGGGTATCAAGATAAAGTACATTCCCAAACCGAAAACAACCTAG 2271 0.4082 MMIVVIGVMGIRLQGRSISSISIKFLISNTQILTHLVLLLGFLLSMVILMLIGSRVDDEQHDALIYIFKTHAVMIVAKLKASSTPDVMKTEVGNDSLDTIIRQAIAKEPFLSFSRAGDSPVQWIQLLHALDQQELPGWPMLTPLKVQLQKCDKCSREFCSPINYRRHIRVQHRLKKLDKDSTNNRYLLGAYWDKLSLEEAKEVISFKNVMLEEVPGSSILQALTTLIRKQGFCSLPQYYLKAGSALLDIVQARYSFPISSQELFSVLDDASEKTFLCGTAVSMQKYVFDGEAGKIGLEPKNLLACTSFMLEQILVKAWLADKDAEALRYQKLLVEEEEAAQKRQAEILERKRQKKLRQKEQKAREHRHEDEAEIKENISSTVESVSQAEASLDTFDFEEHDPNTVSDHVPSRLVPFQCPDTDEGSDEYSKSSHDCGSDQNIEQQTAQGHNHRRVVIAQWQALPKSQLAVANGLHASQNSQVPKLRVIKKYGTYHDQRIAPTVTGNKVWSRKTKPEIDIMPKARLERESNEVKNHEVLIGSISVALDNCRQSKSSLVTSWEGCMVENLAKESSSQEKPAVQHSNNRMAVKLWRPVSRGGLKDIMPIQNCSREDYLDAINKTGDDQNLSDDRCLRFCDIDNSNSVFENNFSVPEDHVASGSLGLSSNAAKAFLAQRWKEAISLNHVKLVLSLDSEPPGYQEIKNCELRTCQSSNVVSHTIPLTAENQLSATSEAAKVKLRMKPERGIKIKYIPKPKTT 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3417 756 ProSiteProfiles Zinc finger C2H2 type domain profile. 149 177 IPR013087 -
Bisa03g3417 756 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 74 755 - -
Bisa03g3417 756 MobiDBLite consensus disorder prediction 398 438 - -
Bisa03g3417 756 ProSitePatterns Zinc finger C2H2 type domain signature. 151 172 IPR013087 -
Bisa03g3417 756 MobiDBLite consensus disorder prediction 351 382 - -
Bisa03g3417 756 Coils Coil 338 365 - -
Bisa03g3417 756 MobiDBLite consensus disorder prediction 362 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3417 Bisa-ChrBisa03 65948259 65970997 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3417 93 752 C2H2 Transcription Factor Family AT4G25610 41.079 2.71e-143 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa03g3417 None None None