LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa03g3388	ATGGCTATAGAGGAGTCTGAGCCAGGTATTCCGGAGATAGAAAGAGAGGAAAACTTAATTGCTGCAGCAAGACACATTGTGAAGGCGTTAGGATCAAATAAGAACCTCACTAATGATGCCAAAAGAATTCTGGCGGATCTTGGCACTCAATTGTCCTCCATCACCCAATCCAGTGAAAAGGAGGAAGGGAAGGATGGGGAAGAAGGAGAGGAAGAGGGGGAAACGGGATTTAGTGTAATTGAAAGTAAGCTTAATGCCATTCAGGAGAAAATAATGAGATGGGAGGAAGATCAGTCAATGATTTGGGATTCCGGACCAGAAGAAGCGTCTGAATATCTGAATGCTGCAGATGAAGCTCGCCGGTTGATTGAAAGATTGGAGAGTATGCATTTGAACAAAGAGGACCAAGAGTACAAGTTTTTGCTGATGGCTCACAGTGTTCTTCAGACAGCAATGGCACGGCTTGAGGATGAGTTTAGGAACTTGCTTATCCAGAACAGGCAGCCTTTTGAGCCTGAATATGTCTCCTTTAGGTCCAGTGAAGAGGACGCCATTGATGAAAGCTCTATAGTCTCTTTAGGTGATGAATCGGTTGAAGAATCTCTTCAAAGAGATAGTGTCAGCAGAGCATATGAGGAGCATATCATTGATCTAGTCCATCCAGAAGTGGTCCAAGATATCAGATGTATTGCAAACTTAATGTTTGCTGCAAACTATGACCAGGAATGTTCCCATGCCTATACCATTGTCCGAAGGGATGCCTTAGATGAGTGTCTCTTCATTCTTGAAATGGAAAGACTGAGCATTGAGGATGTTTTGAAAATGGAGTGGGGTAGTTTGAACTCCAAAATCAAGAGATGGATTTGGGCTGTGAAAATCTTCATTAGGGTGTATCTTGCAAGTGAGAGGTGGCTCAGTGACCAGATTTTTGGGGAGGGGGAAACTGTTAGTCTGACCTGTTTTGTTGGTGCATCAAAGGCTTCAATATTGCAGCTTCTAAATTTTGGTGAAGCCATGTCCATTGGGCCCCACCAACCAGAGAAATTATTTCGTGTTCTTGACATGTATGAGGTTCTGGCAGATCTTATGCCGGATATAGATGCTTTATATTCAGATGACGTTGGTTCTTCTGTTAGAATTGAGTGTCATGAGGTTCTGAAGAGATTAGGTGATTGTGTAAGGGCAACGTTTCTTGAATTTGAAAATGCCATTGCATCAAATGTATCATCTACCCCTTTCGTAGGTGGTGGGATTCATCCTTTGACCAGATATGTCATGAATTATATTAGGACTCTTACTGACTACAGTAATACACTTAATCTGCTTCTGAAAGACCGAGAGGAAGACGATGTCATTTCACTGTCACCTGACATGAGCCCACATACAGAAGATGATAGCAAAATCCAAGGGTCTCCGCCTGGAGTTTCCTCCATGGCCCTCCACTTTCGGTCAGTTGCTTCAATCTTGGAGTGCAACCTTGAAGAGAAGTCCAAGTTATACAAGGAGGCTTCCTTGCAGAATTTGTTCTTAATGAACAATATACATTATATGGCTCAAAAGGTTAAAGGGTCTGAACTGAGGCTCATATATGGAGATGAATGGATTCGAAAGTGCAACTGGAAGTTTCAGCAGCACGCAATGAATTATGAGAGAGCTAGTTGGAGTTCCATTCTGTCCTTGCTTAGGGATGAGGGAATTCAAGTCCCAGGTACAAACTCTATCTCTAAAAATCTTCTTAAGGAGAGATTACGAGGCTTCTATCTTGCCTTTGAGGATGTTTACAGGATCCAAACAGCTTGGATAATCCTAGATCCTCAGCTTCGCGAAGACTTGCGGATCTCTATATCTCTCAAAGTAATTCAAGCTTACAGGACATTTGTGGGGAGGCATAATAGTCACATAAGTGACAAACACATTAAATACAATGCTGATGATTTGGAAAATTACCTTTTGGATTTTTTTGAGGGATCTCTAAAATCATTGCCAAATCCCCACAGGAGATGA	2004	0.4217	MAIEESEPGIPEIEREENLIAAARHIVKALGSNKNLTNDAKRILADLGTQLSSITQSSEKEEGKDGEEGEEEGETGFSVIESKLNAIQEKIMRWEEDQSMIWDSGPEEASEYLNAADEARRLIERLESMHLNKEDQEYKFLLMAHSVLQTAMARLEDEFRNLLIQNRQPFEPEYVSFRSSEEDAIDESSIVSLGDESVEESLQRDSVSRAYEEHIIDLVHPEVVQDIRCIANLMFAANYDQECSHAYTIVRRDALDECLFILEMERLSIEDVLKMEWGSLNSKIKRWIWAVKIFIRVYLASERWLSDQIFGEGETVSLTCFVGASKASILQLLNFGEAMSIGPHQPEKLFRVLDMYEVLADLMPDIDALYSDDVGSSVRIECHEVLKRLGDCVRATFLEFENAIASNVSSTPFVGGGIHPLTRYVMNYIRTLTDYSNTLNLLLKDREEDDVISLSPDMSPHTEDDSKIQGSPPGVSSMALHFRSVASILECNLEEKSKLYKEASLQNLFLMNNIHYMAQKVKGSELRLIYGDEWIRKCNWKFQQHAMNYERASWSSILSLLRDEGIQVPGTNSISKNLLKERLRGFYLAFEDVYRIQTAWIILDPQLREDLRISISLKVIQAYRTFVGRHNSHISDKHIKYNADDLENYLLDFFEGSLKSLPNPHRR	667

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa03g3388	667	MobiDBLite	consensus disorder prediction	51	77	-	-
	Bisa03g3388	667	Pfam	Exo70 exocyst complex subunit	285	651	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Bisa03g3388	667	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	74	656	IPR004140	GO:0000145\|GO:0006887
	Bisa03g3388	667	Gene3D	Exocyst complex component Exo70	90	663	-	-
	Bisa03g3388	667	Coils	Coil	109	136	-	-
	Bisa03g3388	667	SUPERFAMILY	Cullin repeat-like	98	655	IPR016159	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa03g3388	Bisa-ChrBisa03	63469412	63471415	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa03g3388	12	667	EXO70 exocyst subunit family	AT3G29400	49.925	0.0	616