Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3359 ATGGAACAGAAGCACGTCTTGTTATCAGCATTGAGTGTGGGGGTTGGTCTGGGAGTAGGGCTTGGATTGAGCTCAGGGCAGGTCGTGCAGAAATGGGTTGGAGGGAATCGCGAGTCTGGCGAGCTGTCTGGTGAGCAGATTGAGCAGGAGCTCATGAGCCATGTCGTTGATTGCAAGGACAGCCAAGACCCAGTGACATTTGAAGACTTTCCTTATTTCTTAAGTAAAAAAACTAAAGTGTTATTGACAAGTGCTGCATGTGTTCATTTAAAACAACTTCACTCTAAGCACACCCGGAACCTTTCACCGGCAAGCAGGGCAATTCTGCTTTCTGGACCTGCAGAGCTGTACCAGCAAATGCTTGCCAAGGCTTTAGCACATCATTTTGAATCAAAGTTGCTGCTCCTAGATGTTGTTGACTTCTCTTTCAAGCTGCAGAGCAAATATGGATGTATGAGAAAAGAATCATCTTTTAAAAGGTCTTTATCAGATGTGACAATGGATCGAGTTTCCAGATTGTTTGGTTCCTTTTCAATCCTCCCCTTATCTGGTGAAACTAAAGATACTCTGCACAAACCTCCTTCAAAGCTTCGTAGGAATGCCTCTAATGCATCTGACATGGGCAGCACTCCTTCCCAATGTGGTCCAACAAATTCAGCTTCTTTGAAGCATGCAAGCAGCTTGTGTGTTGATGAAAGACTCTTTTTGGAGTCGCTTTACAAGGTCTTGGTTTCAGTCTCAGAAAGAGGTTCCATCATTTTATACATCAGGGATGTTGAGAAGATTTTTCTCCATTCACAGCGGTTGTACAGTTTGTTCCATAAAATGCTGAAGAAACTTTCAGGGCCAGTGTTGATACTCGGTTCCCAGATGTTAAATGAAAATGATAGTGAATTAGTTGATGAAAGGCTTGCCATTTTATTCCCTTACAACATTGAAATAGAACCACCTGAAGATGATATTCGTATTGGAAACTGGAAATCCGAACTGGAAGAGGAAATGAAAAAAATTCAGTTTAGAGATAACAGAAACCACATTGCTGAAGTACTTTCTGAAAATGACATTGAATGTGATGACTTGAATTCAATCTGCCATGCAGACACAATGATACTGAGTAATCATATTGAAGAAATTGTAGTATCTGCAATATCTTATCATTTGATGAGTACCAAGGATCCAGAATACCGAAATGGAAAGCTAGTAATATCATCCGAGAGTTTGTCCCGTGGTTTGAGTCTATTCCAGGAAGGCAAAAGCAGTGTGGAGGATACTCTGAAGCTAGAGGCTAATGGAAAGAAGGACCCTGCTGGAGAAGAGTGTACTGGTGCAGGTGCAAAAAATGAGGCACGGTCTGACTCTCAAGCACCTGAAAACAAGAGTGAGATAGAGAAATCTATTCCTATAGCAAAGAAAGATGGAGAGAATTCTGCTCCAACAAAAGCAGCTGAACCTGACAATGAGTTTGAGAAGCGCATTAGATCAGAGGTCATCCCTGCAAATGAGATAGGGGTTACATTTGCAGATATTGGTGCATTAGATGATATTAAAGAATCACTTCAAGAGTTGGTCATGCTACCCCTTCGAAAACCATACCTCTTCAAAGGTGGGCTTCTAAAGCCTTGTAAAGGTATATTGCTTTTTGGACCACCGGGAACCGGAAAAACAATGCTTGCAAAGGCAATTGCAAAGGAAGCTGGAGCTAGTTTTATCAATGTCTCAATGTCTACAATCACTTCAAAATGGTTTGGAGAAGATGAAAAGAATGTCCGAGCTCTGTTCACACTAGCAGCAAAGGTTGCTCCAACTATTGTTTTTGTTGATGAGGTTGATAGCATGCTTGGGCAGCGGACAAGAGTTGGAGAGCATGAGGCCATGAGGAAGATTAAAAATGAATTCATGACCCACTGGGATGGACTGTTAACAAAACCTGGTGAGCAAATTCTAGTTCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATCATAAGACGGTTTGAGCGAAGAATCATGGTTGGTCTTCCGACTGTTGAGAACAGGGAAATGATCTTGAAAACTCTCTTAGATAAGGAAAAGACTGAAAATTTTGACTTCAAAGAGCTTGCAGTCATGACAGAAGGATATAGTGGAAGTGATCTTAAGAATTTGTGCACCACTGCAGCTTATCGACCTGTTAGGGAGCTAATAAAGCAAGAGGGACTGAAGGATATGGAAAAGAAGAAAAAAGAGCGAGATGGCCAAAGCTCAGAAGAAGACTCGGATACTAAGGAGGATAAAGAAGAGCGAGTAATTACCCTGAGGCCTTTAAACATGGAAGATATGAGACAGGCCAAGAGTCAGGTTGCCTCTAGTTTTGCTGCTGAAGGATCAATTATGGGTGAGCTGAAGCAGTGGAATGAACTATATGGAGAAGGAGGTTCAAGGAAGAAACAGCAGCTCACTTACTTCCTTTAG 2457 0.42 MEQKHVLLSALSVGVGLGVGLGLSSGQVVQKWVGGNRESGELSGEQIEQELMSHVVDCKDSQDPVTFEDFPYFLSKKTKVLLTSAACVHLKQLHSKHTRNLSPASRAILLSGPAELYQQMLAKALAHHFESKLLLLDVVDFSFKLQSKYGCMRKESSFKRSLSDVTMDRVSRLFGSFSILPLSGETKDTLHKPPSKLRRNASNASDMGSTPSQCGPTNSASLKHASSLCVDERLFLESLYKVLVSVSERGSIILYIRDVEKIFLHSQRLYSLFHKMLKKLSGPVLILGSQMLNENDSELVDERLAILFPYNIEIEPPEDDIRIGNWKSELEEEMKKIQFRDNRNHIAEVLSENDIECDDLNSICHADTMILSNHIEEIVVSAISYHLMSTKDPEYRNGKLVISSESLSRGLSLFQEGKSSVEDTLKLEANGKKDPAGEECTGAGAKNEARSDSQAPENKSEIEKSIPIAKKDGENSAPTKAAEPDNEFEKRIRSEVIPANEIGVTFADIGALDDIKESLQELVMLPLRKPYLFKGGLLKPCKGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIVFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPTVENREMILKTLLDKEKTENFDFKELAVMTEGYSGSDLKNLCTTAAYRPVRELIKQEGLKDMEKKKKERDGQSSEEDSDTKEDKEERVITLRPLNMEDMRQAKSQVASSFAAEGSIMGELKQWNELYGEGGSRKKQQLTYFL 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3359 818 MobiDBLite consensus disorder prediction 188 218 - -
Bisa03g3359 818 MobiDBLite consensus disorder prediction 428 489 - -
Bisa03g3359 818 MobiDBLite consensus disorder prediction 734 770 - -
Bisa03g3359 818 SMART AAA_5 540 677 IPR003593 GO:0016887
Bisa03g3359 818 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 503 678 - -
Bisa03g3359 818 Pfam AAA+ lid domain 696 740 IPR041569 -
Bisa03g3359 818 MobiDBLite consensus disorder prediction 452 470 - -
Bisa03g3359 818 ProSitePatterns AAA-protein family signature. 647 666 IPR003960 GO:0005524|GO:0016887
Bisa03g3359 818 Pfam ATPase family associated with various cellular activities (AAA) 544 674 IPR003959 GO:0005524|GO:0016887
Bisa03g3359 818 MobiDBLite consensus disorder prediction 196 218 - -
Bisa03g3359 818 Gene3D - 676 751 - -
Bisa03g3359 818 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 46 817 - -
Bisa03g3359 818 MobiDBLite consensus disorder prediction 734 769 - -
Bisa03g3359 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 723 IPR027417 -
Bisa03g3359 818 Gene3D - 503 675 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3359 Bisa-ChrBisa03 62533235 62542466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3359 504 733 Calmodulin-binding Proteins AT3G56690 38.462 1.04e-40 159