Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3354 ATGGCTAGTTCTATTTCTTGTTCTTGTTATGGATGGGTCTTGTTGGCTCTGGTTTTGGCTGGTGCTGGTGGGTGCAATGGTTCGAGCCAGATTGGGCTGGGCTCGAGGCTGTTGGCTAGCCAGGGTCAAGTTTGGGTTTCAGATAATGGCACATTCGCGTTTGGGTTCACGCCAGCGGAAACTGATGAGAGAATGTTTGTGCTGGGGATTTGGTTCGCTAAGCTTCCTGGAGATCGAACTCTGGTTTGGTCACCTAACAGAGACTCCCCCGCCTCTCAAAATGCAATCTTGGAGCTCGACGCTACCGGCAACCTCGTCCTCACCGACGGACACGTCACCCTCTGGACATCCAACACCTCCGGCGCTGGCGTCCAGTCAGCATCCATGGCAGAATCCGGCAACTTCATCCTCCACTCCGCCGTCTCCAGCAACCGCCCTGTGTGGCAGAGCTTCTCCCAACCCTCCGACACCCTCCTTCCAACCCAACCCCTAACCGTCTCCTCCGAACTCACATCCTCAAATTCCGCCTCCCATGGCGGCTACTACGCCCTCAAAATGCTTCAACAATCCACCTCCTTAAGCCTCTCCCTCACTTACATCCTCCCAGATTCTCAATCATTCGCCAACTATTCCTACTGGCAAGGCCCTGATATCTCCAACGCCACAGGGGACGTAACTGCAATTCTCGACCAAGCAGGAAGCTTCGGGATTGTGTACGGAGATTCCTCAAACGGGGCTGTTTATGTGTACAAGAATGAAAACGACGATGCGGGTTTATCTTATCCCTCTCCCCAAACAACCGCATTCAGTGTTCTTCGACGACTAACACTGGAAAAGAATGGAAATCTGCGTTTGTATCGCTGGGACGACGATGTGAATGGGTCGAGTCAGTGGGTGTCAGAGTGGGCTGCAGTATCAAACCCATGTGATATCGCTGGAATTTGCGGTAATGGGGTTTGTAAATTGGACAGAACCAAAACAAACGCTTCTTGTACTTGCTTACCTGGGACTTCTGAAATAGGAACAGATGGACGATGTTACGAGAATTCCTCACTGGTCGGAAAATGCAATTCCCGACAAGAAAACAAGACCCAGAACCGGACATCAGAGTTTAGGATTTCTGTAGTGCAGCTGACAAATTACTATTTTTCTGAGACTTCAGTGGTGGCGAACTACAGTGATGTTGCTACAGTGTCAAAATGTGGGGATGCTTGTTTATCAGATTGTGACTGTGTGGCTTCAGTTTATGGGCTAAATGAAGAGACACCATACTGTTGGGTTTTAAGGAGCTTGGATTTTGGTGGGTTTGAGGATACTACCTCGACTCTGTTCGTGAAGGTGAGGTCAAATGGCTCAGTGATACCTGAGGGACAGGGTGAAGCAGGAGGATCTGGTGGTGGTGGTTCGGATGGTGGGTTAGGGAGTGGCAAAGAGAAGGTGGTGGTTATTCCCACTGTTCTCTGCATTACGTTTCTTATTGCTCTGTTATGTTTGTTACTTTACTATAGTGTTCATCGAAAAAGAACATTAAAGAGGGAGATGGAAAGCTCCTTGATCTTATCGGGTACTCCAGTGAACTTCACCTACCGTGATTTACAAATCAGGACATCTAATTTCTCACAGCTTCTAGGAATAGGTGGATTTGGGAGTGTGTACAAAGGAAGCCTTGGAGATGGGACACAAGTGGCAGTGAAGAAACTTGATAGGGTTTTGCCTCATGGAGAGAAGGAGTTTATCACTGAAGTAAACACAATTGGCTCTATGCATCATATGAGTTTGGTTCGCTTATGTGGCTATTGCTCTGAAGGATCACATCGGCTTCTAGTGTACGAGTTCATGAAAAACGGGTCTTTGGACAAATGGATCTTCACTTCCTATCGAGGACGTGACAGGCTTTTGGATTGGCCAACTCGCTTCAACATAGCCATTGCCACTGCACAAGGGATTGCATACTTTCACGAGCAGTGCAGGAATCGAATAATACACTGTGACATAAAACCAGAGAACATACTCTATGGGATGCTTCTGCTAGAGATCGTCGGTGGTCGTAGGAATCTTGACATATCCTTTGATGCAGAGGACTTCTTCTACCCTGGTTGGGCTTTCAAGGAGATGACAAATGGGTCACCAATAAAAGTAGCAGACAGAAGATTAAATGGTGCAGTTGATGAAGAAGAGCTTACGAGAGCTCTAAGAGTTGCATTTTGGTGCATCCAAGATGAGGTTTTCACGAGACCAACAATGGGTGAAGTGGTGAGGATGCTTGAAGGCTCCATCAGCATCAACACACCTCCAATGCCACAAACAGTGTTAGAGTTGATCGAGGAAGGTTTGGACCAAGTGTACAGAGCCATGAAAAGAGAACACAACCCCTTCAGCTCCTCCACCATCACTAGCCATCCTTCTTCCAATGCCACTTGTAGCAATTCCTCCATGTCACCTAGATAG 2448 0.4783 MASSISCSCYGWVLLALVLAGAGGCNGSSQIGLGSRLLASQGQVWVSDNGTFAFGFTPAETDERMFVLGIWFAKLPGDRTLVWSPNRDSPASQNAILELDATGNLVLTDGHVTLWTSNTSGAGVQSASMAESGNFILHSAVSSNRPVWQSFSQPSDTLLPTQPLTVSSELTSSNSASHGGYYALKMLQQSTSLSLSLTYILPDSQSFANYSYWQGPDISNATGDVTAILDQAGSFGIVYGDSSNGAVYVYKNENDDAGLSYPSPQTTAFSVLRRLTLEKNGNLRLYRWDDDVNGSSQWVSEWAAVSNPCDIAGICGNGVCKLDRTKTNASCTCLPGTSEIGTDGRCYENSSLVGKCNSRQENKTQNRTSEFRISVVQLTNYYFSETSVVANYSDVATVSKCGDACLSDCDCVASVYGLNEETPYCWVLRSLDFGGFEDTTSTLFVKVRSNGSVIPEGQGEAGGSGGGGSDGGLGSGKEKVVVIPTVLCITFLIALLCLLLYYSVHRKRTLKREMESSLILSGTPVNFTYRDLQIRTSNFSQLLGIGGFGSVYKGSLGDGTQVAVKKLDRVLPHGEKEFITEVNTIGSMHHMSLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFTSYRGRDRLLDWPTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILYGMLLLEIVGGRRNLDISFDAEDFFYPGWAFKEMTNGSPIKVADRRLNGAVDEEELTRALRVAFWCIQDEVFTRPTMGEVVRMLEGSISINTPPMPQTVLELIEEGLDQVYRAMKREHNPFSSSTITSHPSSNATCSNSSMSPR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3354 815 Pfam S-locus glycoprotein domain 248 336 IPR000858 GO:0048544
Bisa03g3354 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Bisa03g3354 815 SUPERFAMILY Protein kinase-like (PK-like) 515 756 IPR011009 -
Bisa03g3354 815 ProSitePatterns Protein kinases ATP-binding region signature. 543 566 IPR017441 GO:0005524
Bisa03g3354 815 FunFam Serine/threonine-protein kinase 32 152 - -
Bisa03g3354 815 Gene3D - 29 153 IPR036426 -
Bisa03g3354 815 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Bisa03g3354 815 Gene3D Transferase(Phosphotransferase) domain 1 613 671 - -
Bisa03g3354 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 156 IPR036426 -
Bisa03g3354 815 Pfam D-mannose binding lectin 80 169 IPR001480 -
Bisa03g3354 815 MobiDBLite consensus disorder prediction 791 815 - -
Bisa03g3354 815 CDD B_lectin 40 154 IPR001480 -
Bisa03g3354 815 PANTHER OS07G0415500 PROTEIN 4 672 - -
Bisa03g3354 815 Gene3D Transferase(Phosphotransferase) domain 1 672 771 - -
Bisa03g3354 815 PIRSF SRK 672 809 IPR024171 GO:0004674
Bisa03g3354 815 PIRSF SRK 1 671 IPR024171 GO:0004674
Bisa03g3354 815 SMART serkin_6 537 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3354 815 ProSiteProfiles Protein kinase domain profile. 537 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3354 815 FunFam serine/threonine-protein kinase PBS1-like 505 612 - -
Bisa03g3354 815 Gene3D Phosphorylase Kinase; domain 1 501 612 - -
Bisa03g3354 815 Pfam Protein kinase domain 540 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3354 815 SMART blect_4 36 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3354 Bisa-ChrBisa03 62371827 62378197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3354 489 765 Receptor kinase-like Gene Family AT5G20050 33.520 3.55e-45 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa03g3354 Pkinase 3.7e-23 CL0016