Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3308 ATGCAGTCCGACGCCTCCTCCGGCGAACCCGTGGTGCCCGTCGAGGTGACCGGGACAGGACTGGCACAACCGCACGAAGGAGGAGTCAACGGCGGCGGCGAGACGGTGATTGGGATGGACACAACAACAATTTCAGGAGAATTAGAAGAGAAGGGAATGATAAGAATTGGAGACGAAGGTGACAAGATCAATAGTATTGGGGGGAATCGGTGGCCCCGCCAAGAGACCTTGGCTCTCTTGAAGATAAGGTCTGATATGGATGCTGTGTTTCGTGATTCAAGTCTCAAAGCTCCTCTCTGGGAAGAAGTTTCAAGGAAACTAGGAGAGCTTGGGTATAAGCGAAGCGCGAAGAAGTGCAAGGAGAAATTCGAGAATGTGTACAAGTACCACAAGAGAACCAAAGACACCAGAAATGCCAAACCCGAAGGAAAGAGCAAAACCTATAGATTCTTCGATCAATTACAAGCCCTCGAATCTCGACCCTTCATTCAATCTCACCCTCCACAACCTCAACCTCAACCTTCAAATTATTTGGCCACAAATACACTAACCACATTGCCCTTCCCAACAAGGCCTAATGATCATTTAAATTTTACCACCATCACCGCCACTGCCACTACCACTACTGTTCCATCCACGACAGCTACGGCCACGGCCACTGCCTCCACATCTTCGTCGACGGCGTCGGACGAGGACTTGGAGGAGAGGTACAGGAAGAAGAGGAAGTGGAAGGAGTACTTTAGGAGGCTCACGCGGCGCGTGCTGGCCAGACAGGAGGAGATGCAGAAACGGTTCCTGGAAGCCATCGACAAACGTGAGCGTGAGCGCGTGGCGCAGCAGGAGGCTTGGAAAATGCAGGAGATGGCCCGGATCAACCGCGAGCACGAGATCCTCGTGCAAGAACGATCCACCGCCGCCGCCAAAGACGCCGCCGTCCTCGCATTCCTTCAAAAGCTCTCCGCCGGCACCACACCCCAACCACCACTTCCATCACCTCCTCCGCCGCAGCCACAATTAATGATCCCAAATAATTGCGAAAAAATTGAAATCCAGAAAGTGGTTAATTATAACAGCAACCACAACCACAATAGCAATGGCTGCGGCGGCGGCGGCGGCGGTAGTGGCGGTGGAGGAGGAGGAATCTCGTCGTCATCGTCGCGGTGGCCGAAGGCGGAGGTGCACGCGTTGATAAGGCTGAGGATGAGTCTGGAGGCGAAGTATCAGGAAAATGGGCCGAAAGGCCCATTGTGGGAGCACATATCGTTGGGAATGCAGAGGCTTGGGTATAACAGAAGCGCGAAGAGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTATTTCAAGAAGATTAAAGAGAGTAAAAGGCAAAGACCTGAAGATAGCAAGACTTGTCCGTACTATCAAGAGCTCGATGCTTTGTACTCTCAGAAGAGCCAAACACAGAGTAGTAATATTAATCATTTCAATTTCAACCTCTTCGGTTCAATTGGTCACAATGTGGAGCCGTTAATGGTGCAACCAGAGCAGCAATGGAGGCCTCCCAAGGAAAATGCAGGTCACGAGGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAAATGAAGAAGACGGAGGAAGTATGGAATTAATAGAGGAAGAAAGAGGTGGAGAGAATGAGAATGATAATAATAATAATGGGACAAATAAACTTTCTTCAGTGGACACATTGGAATGA 1725 0.5009 MQSDASSGEPVVPVEVTGTGLAQPHEGGVNGGGETVIGMDTTTISGELEEKGMIRIGDEGDKINSIGGNRWPRQETLALLKIRSDMDAVFRDSSLKAPLWEEVSRKLGELGYKRSAKKCKEKFENVYKYHKRTKDTRNAKPEGKSKTYRFFDQLQALESRPFIQSHPPQPQPQPSNYLATNTLTTLPFPTRPNDHLNFTTITATATTTTVPSTTATATATASTSSSTASDEDLEERYRKKRKWKEYFRRLTRRVLARQEEMQKRFLEAIDKRERERVAQQEAWKMQEMARINREHEILVQERSTAAAKDAAVLAFLQKLSAGTTPQPPLPSPPPPQPQLMIPNNCEKIEIQKVVNYNSNHNHNSNGCGGGGGGSGGGGGGISSSSSRWPKAEVHALIRLRMSLEAKYQENGPKGPLWEHISLGMQRLGYNRSAKRCKEKWENINKYFKKIKESKRQRPEDSKTCPYYQELDALYSQKSQTQSSNINHFNFNLFGSIGHNVEPLMVQPEQQWRPPKENAGHEDEEEEEEEEEEDEEENEEDGGSMELIEEERGGENENDNNNNGTNKLSSVDTLE 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3308 574 SMART sant 384 446 IPR001005 -
Bisa03g3308 574 SMART sant 67 129 IPR001005 -
Bisa03g3308 574 MobiDBLite consensus disorder prediction 557 574 - -
Bisa03g3308 574 Gene3D - 71 132 - -
Bisa03g3308 574 Gene3D - 388 449 - -
Bisa03g3308 574 MobiDBLite consensus disorder prediction 510 574 - -
Bisa03g3308 574 MobiDBLite consensus disorder prediction 211 228 - -
Bisa03g3308 574 PANTHER FI21293P1 54 535 - -
Bisa03g3308 574 FunFam Trihelix transcription factor GT-2 388 449 - -
Bisa03g3308 574 ProSiteProfiles Myb-like domain profile. 380 444 IPR001005 -
Bisa03g3308 574 Pfam Myb/SANT-like DNA-binding domain 386 473 IPR044822 -
Bisa03g3308 574 Pfam Myb/SANT-like DNA-binding domain 69 156 IPR044822 -
Bisa03g3308 574 ProSiteProfiles Myb-like domain profile. 69 127 IPR001005 -
Bisa03g3308 574 CDD GT1 69 134 - -
Bisa03g3308 574 MobiDBLite consensus disorder prediction 211 231 - -
Bisa03g3308 574 Coils Coil 515 541 - -
Bisa03g3308 574 MobiDBLite consensus disorder prediction 520 545 - -
Bisa03g3308 574 CDD GT1 387 451 - -
Bisa03g3308 574 MobiDBLite consensus disorder prediction 365 386 - -
Bisa03g3308 574 FunFam Trihelix transcription factor GT-2 71 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3308 Bisa-ChrBisa03 59953899 59956298 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3308 67 510 Trihelix Transcription Factor Family AT1G76890 46.746 5.89e-134 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa03g3308 Myb_DNA-bind_4 3.7e-21 CL0123