Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3305 ATGCTGGGGGACTCATCGTTGGGAGGAGGAGGAGGTGGTGGTGGCAGCTCCTCCGATGCAGTGACGGCGCCGCCAACGGTGGAGGTTGACGGTGGAGATGCAGCGGCGGCTGCGGCTGGATCGAATTCTGGAGAGGATGAGCGAGGTAGAGGAGAAGAAGGCGACCGGAGCTTCGGAGCCAACCGGTGGCCTCGTCAGGAGACTTTGGCTCTCTTGAAGATACGCTTAGATATGGACGTTGCGTTTCGAGATGCGAGCGTGAAAGGTCCTCTCTGGGAAGACGTTTCTAGGAAGCTGGCAGAGATGGGGTATCACAGAAGCGCCAAGAAGTGCAAAGAGAAGTTCGAGAACGTGTACAAGTACCACAAGCGAACAAAAGAAGGCCGAACCGGGAAATCGGAAGGAAAAACGTACCGTTTCTTCGATCAGTTAGAAGCTTTAGATCATCAAAACCACCATCCTCCTCCTCCACCACCACAACCACAACAATCAAAGCCACCACATTTATTGGCAATACCTGCAACCCCAGTATCAGTGGTAGCAACAATAACATCAACAACTCCATTATCATCATCCACAAGCATTCCTCCTCAACCTCAAGTCCCTACTGTTTCATCAACAATTACACTCCCTCAAGCCAATGTTTCCTACAATTTTCCACCACCGCCACCACCATCAACAGCAAACCCTACTCCTTCTTCTTTTCCCTCCATTCCCACTGATCTCTTGTCGAACTCCACCTCCTCCTCCACCTCCTCCGATGAGTCCATCGAGCGGCGGCACAAGCGGAAGCGCAAGTGGAAGGACTTCTTCGGCAGGCTGACGAAGGAGGTTATAGAAAAGCAGGAAGAAATGCAGAAGAGGTTCTTGGAGGCCATAGAGAAGCGAGAGCACGAGCGGATGGTCCGCGAGGAGGCCTGGAGAATGCAGGAGATGGCGAGGATCAATCGGGAAAGAGAGATTCTCGCGCAGGAGAGATCTATCGCCGCCGCAAAAGACGCCGCCGTCATGGCATTCTTGCAGAAGGTCGCCGAGCAGCAAAATCTCGGACTCCCATTGAATAACATCAACATTAATCCTCCTCCTCCTCAACCGCCCCACCCTCCCCCAACACCCACAATGGGAATGCCGATCCCCACTGTGCAATCAGCGGCACAATCGGCATCAGTTCCCGCCCCGCCGGCCCCACCGCAACAGATGACAAACATGGAGATTGTAGTAACTGAGAATAACAATAAAAATAACAATAATGTGGAGAATTTGAATTTGATGGCGCCGAGCTCGTCCAGGTGGCCGAAGGTGGAGGTTCAGACGTTGATAAATCTGAGGACGAACATGGATGAGAAGTACCAAGAGAATGGGCCGAAGGGGCCTCTGTGGGAGGAGATCTCGGCGGCGATGAGGCGGCTCGGGTACAACCGGAACGCGAAGAGGTGCAAGGAGAAGTGGGAGAACATAAACAAGTACTTCAAGAAGGTGAAGGAGAGCAATAAGAAGAGGCCGGAGGACTCCAAGACCTGTCCGTACTTTCACCAGCTAGATGCTCTTTACAAGGAGAAGAACAAGCTGGAGATGGCTAATCCTTCCTCGTCGACGAACCGTAACTTGAAGGCGGAGATGGCAGCGCCGCTGATGGTGCGGCCAGAGCAGCAATGGCCGCCTCAGCAAGGGGTTGGGGAGGATATGAAGAGTAATAAGGAGAATAACAACAACAATAATAATAATAACAACAGCAATGAGGAAGATGAAGAGGAAGATGTGGACGATGAGAAGGATATTGGAGAAGAAGAAGAAGAAGAAGATGAGGAGGAGGAAGGAGGAGGGAACTACGAGATAGTGGCAAGCAAGCCAACTTCAGTGAGTGCAGCTGAGTGA 1875 0.5211 MLGDSSLGGGGGGGGSSSDAVTAPPTVEVDGGDAAAAAAGSNSGEDERGRGEEGDRSFGANRWPRQETLALLKIRLDMDVAFRDASVKGPLWEDVSRKLAEMGYHRSAKKCKEKFENVYKYHKRTKEGRTGKSEGKTYRFFDQLEALDHQNHHPPPPPPQPQQSKPPHLLAIPATPVSVVATITSTTPLSSSTSIPPQPQVPTVSSTITLPQANVSYNFPPPPPPSTANPTPSSFPSIPTDLLSNSTSSSTSSDESIERRHKRKRKWKDFFGRLTKEVIEKQEEMQKRFLEAIEKREHERMVREEAWRMQEMARINREREILAQERSIAAAKDAAVMAFLQKVAEQQNLGLPLNNININPPPPQPPHPPPTPTMGMPIPTVQSAAQSASVPAPPAPPQQMTNMEIVVTENNNKNNNNVENLNLMAPSSSRWPKVEVQTLINLRTNMDEKYQENGPKGPLWEEISAAMRRLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYKEKNKLEMANPSSSTNRNLKAEMAAPLMVRPEQQWPPQQGVGEDMKSNKENNNNNNNNNNSNEEDEEEDVDDEKDIGEEEEEEDEEEEGGGNYEIVASKPTSVSAAE 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3305 624 ProSiteProfiles Myb-like domain profile. 429 487 IPR001005 -
Bisa03g3305 624 MobiDBLite consensus disorder prediction 213 263 - -
Bisa03g3305 624 SMART sant 59 121 IPR001005 -
Bisa03g3305 624 SMART sant 427 489 IPR001005 -
Bisa03g3305 624 MobiDBLite consensus disorder prediction 544 624 - -
Bisa03g3305 624 MobiDBLite consensus disorder prediction 578 608 - -
Bisa03g3305 624 FunFam Trihelix transcription factor GT-2 63 124 - -
Bisa03g3305 624 FunFam Trihelix transcription factor GT-2 431 492 - -
Bisa03g3305 624 Gene3D - 431 492 - -
Bisa03g3305 624 Gene3D - 63 124 - -
Bisa03g3305 624 MobiDBLite consensus disorder prediction 557 577 - -
Bisa03g3305 624 CDD GT1 61 126 - -
Bisa03g3305 624 ProSiteProfiles Myb-like domain profile. 61 119 IPR001005 -
Bisa03g3305 624 MobiDBLite consensus disorder prediction 359 397 - -
Bisa03g3305 624 MobiDBLite consensus disorder prediction 151 166 - -
Bisa03g3305 624 MobiDBLite consensus disorder prediction 45 60 - -
Bisa03g3305 624 Pfam Myb/SANT-like DNA-binding domain 61 147 IPR044822 -
Bisa03g3305 624 Pfam Myb/SANT-like DNA-binding domain 429 516 IPR044822 -
Bisa03g3305 624 MobiDBLite consensus disorder prediction 1 63 - -
Bisa03g3305 624 MobiDBLite consensus disorder prediction 216 232 - -
Bisa03g3305 624 PANTHER FI21293P1 35 579 - -
Bisa03g3305 624 MobiDBLite consensus disorder prediction 148 169 - -
Bisa03g3305 624 MobiDBLite consensus disorder prediction 359 376 - -
Bisa03g3305 624 CDD GT1 429 494 - -
Bisa03g3305 624 Coils Coil 563 600 - -
Bisa03g3305 624 MobiDBLite consensus disorder prediction 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3305 Bisa-ChrBisa03 59783880 59786611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3305 52 552 Trihelix Transcription Factor Family AT1G76880 54.789 3.26e-167 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa03g3305 Myb_DNA-bind_4 1.3e-22 CL0123