Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3270 ATGGAATATTTCCAAAGGCGAGTAATTCGACGAACACAGCTTCGTCCCTCCAAAAAACAAACAACTACGGGGTGGGCCGTTGGGATACCACTTCGCCGCGGGAGCGACCTCAGGAGAAGGATGTCTCACAGGAAGTTCGAACACCCCAGGCATGGTTCACTGGGATTTCTCCCAAGGAAGCGGGCTGCACGTCACAGGGGAAAAGTGAAGGCATTCCCCAAGGATGATCCTAGCAAATCACCCAAGCTTACTGCCTTCTTGGGTTACAAGGCAGGCATGACTCACATTGTTAGAGAGGTCGAGAAACCAGGATCAAAACTTCACAAGAAGGAAACTTGTGAACCTGTTACAATTATTGAGACCCCTCCAATGGTTATTGTTGGAGTTGTGGGTTATGTGAAAACTCCCCGTGGTCTTCGAACATTGAACACTGTATGGGCTCAGCATTTAAGCGAGGATGTGAAGCGCAAGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCTCTAAGTACTCCAAGCAGTTTGAATCTGAGGAAGGGAAGAAAAACATTCAGGCACAGCTTGAGAAAATTAAGAAGTATGCATCTGTTGTCCGTGTTTTGGCTCACACCCAGATCCGAAAAATGAAAGGGTTGAAGCAGAAGAAAGCGCACCTCATGGAGATTCAGGTCAATGGCGGCACTGTTGCACAGAAGGTGGACTATGCATACAATTTCTTTGAGAAGCAGGTTCCTATTGATGCTGTATTCCAGAAAGATGAGATGATTGACCTCATTGGTGTGACAAAGGGTAAGGGGTATGAAGGTGTTGTCACTCGTTGGGGTGTTACCCGTCTTCCCCGCAAGACTCACAGGGGTCTGAGGAAGGTGGCTTGTATTGGTGCCTGGCATCCTGCCAGAGTTTCTTTCACTGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGAACAGAGATGAACAAGAAGATTTACAAACTTGGCAAATCTGGACAGGAGTCACACGAAGCTGTTACTGAGTTTGACAGGACTGAGAAAGACATAACACCTATGGGTGGCTTTCCTCACTATGGTATTGTGAAGGATGACTTTGTGATGATCAAGGGATGCTGTGTTGGTCCCAAGAAAAGGGTCATTACTTTGCGCCAATCCCTCATTAAGCAAACTTCTCGCCTTGCTCTGGAGGAGATCAAGCTCAAGTTTATCGACACATCTTCAAAGTTTGGGCATGGCCGCTTCCAGACAACACAAGAGAAGCAAAAGTTCTTCGGACGTCTCAAGGCATAA 1290 0.4713 MEYFQRRVIRRTQLRPSKKQTTTGWAVGIPLRRGSDLRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKSPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEDVKRKFYKNWCKSKKKAFSKYSKQFESEEGKKNIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTVAQKVDYAYNFFEKQVPIDAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKSGQESHEAVTEFDRTEKDITPMGGFPHYGIVKDDFVMIKGCCVGPKKRVITLRQSLIKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3270 429 SUPERFAMILY Translation proteins 44 410 IPR009000 -
Bisa03g3270 429 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 41 424 IPR045077 GO:0003735|GO:0005840|GO:0006412
Bisa03g3270 429 FunFam 60S ribosomal protein L3 41 114 - -
Bisa03g3270 429 ProSitePatterns Ribosomal protein L3 signature. 252 275 IPR019926 -
Bisa03g3270 429 FunFam 60S ribosomal protein L3 123 247 - -
Bisa03g3270 429 FunFam 60S ribosomal protein L3 266 314 - -
Bisa03g3270 429 Gene3D - 123 247 - -
Bisa03g3270 429 Gene3D Translation factors 84 425 - -
Bisa03g3270 429 FunFam Ribosomal protein L3 305 429 - -
Bisa03g3270 429 Pfam Ribosomal protein L3 41 410 IPR000597 GO:0003735|GO:0005840|GO:0006412
Bisa03g3270 429 FunFam 60S ribosomal protein L3 84 179 - -
Bisa03g3270 429 Gene3D Ribosomal protein L3, domain 3 41 314 IPR044892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3270 Bisa-ChrBisa03 58292478 58296001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3270 41 427 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 85.013 0.0 690