Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3268 ATGTGCTTGCTAACGGTGGCGCACCAACGGGGGTCAGGCGAGTTCGGTAGGTTCTCAGCCCAGCACGGCGAATCAAGTGGCGGCGGCGGTGGCGAGGAAGAAGACAGTCATAGGCTGTCTCATGAGTTAGGAGTCGAAGAAGAAGCATTGAACCAACCGGTGCGGTCGACGGAGGCTGGGTTCTTAGTGGATAGCAGCGACCGAGAGCTGACGGCGATGGTGTCGGCGCTGACGCATGTGGTGTCAGGGTCCGGCCAGAGAGGCACCGAATGGGTCCCTGTGACGTCATCTTTTGGTCAGGTGGCTTCTCCTCCGGCCTTTTCGGCTTATTCGTCTTCTTCTTCTTCAGGCTCTGTTTTGGGCTCTGCCTATGGTTCGGGGTCATGGGTTGGCCACAAAAGAGGGCGTGAAGATCAGAGTTATCTGCCTATGTTTAGACCCATTGGTGACTTCGGTGTACCTTCTCAGGGTGACTCATCTTCAGCAACCCAAGCAGTCCCAAACATGGCAACCACCGCGGCGACGGCGACGGCGACGGCGACATCCGCCGGCGGGGCCGACGAGGAGACCGGAGAGAGGAGGAGGAGATACAGAGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCCGCTGAAATTCGTGATCCCCACAAAGCCGCCAGAGTGTGGCTCGGAACATTCGACACCGCCGAGGCCGCCGCCAGAGCCTACGATGAAGCTGCATTGAGATTCCGAGGTAACAGAGCCAAACTCAATTTCCCCGAAAACGTTCGCGTCGTGCCACCTGTCCCCAACTTCCCCGCCACCCGCCTCGCCATCTCCGACTCCCCCGCCACCCTCATTCCGCCGCCTCATCCGCCGCAGCATCTTCAGCCTCCGTTCGTGCACTCGCCGTCCTCGGATTTGATCAGAGACTACTGGGAGTACTCTCAGCTGCTACAGAGCTCCGGCGACTTCCATGGACAACAATCACAACAACAATTACTACAACAACAGCAGCAACAGCAACAGCAGTCGAATTTGTTGCAACAATGGTTCTATAATTCACAATTGGCGGCTCTTCAATCGTCTTCGTCGTTATTGCCGTCGTCGTCGTCACCATTGTCCTCGTCTTCTTCACCAACTGCTTTTTCGCCGTCGAGTCAGATATCCTCTGCCTCGTATCCCCTGTTTTCTGGTCAGCAAGGGGGGTACTTCCGGCCACCGGGGAGCCAGTCTCAGGGCGGTGGAAGCAGCAGCGGGTCAGATTTGCCTCCGGCGACTTGGTCAGATACCAGTGGCTACCCTCCTTCATCCGGTTGA 1299 0.5781 MCLLTVAHQRGSGEFGRFSAQHGESSGGGGGEEEDSHRLSHELGVEEEALNQPVRSTEAGFLVDSSDRELTAMVSALTHVVSGSGQRGTEWVPVTSSFGQVASPPAFSAYSSSSSSGSVLGSAYGSGSWVGHKRGREDQSYLPMFRPIGDFGVPSQGDSSSATQAVPNMATTAATATATATSAGGADEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRVVPPVPNFPATRLAISDSPATLIPPPHPPQHLQPPFVHSPSSDLIRDYWEYSQLLQSSGDFHGQQSQQQLLQQQQQQQQQSNLLQQWFYNSQLAALQSSSSLLPSSSSPLSSSSSPTAFSPSSQISSASYPLFSGQQGGYFRPPGSQSQGGGSSSGSDLPPATWSDTSGYPPSSG 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3268 432 FunFam Ethylene-responsive transcription factor 2 195 254 - -
Bisa03g3268 432 CDD AP2 204 255 IPR001471 GO:0003700|GO:0006355
Bisa03g3268 432 MobiDBLite consensus disorder prediction 28 43 - -
Bisa03g3268 432 SMART rav1_2 196 259 IPR001471 GO:0003700|GO:0006355
Bisa03g3268 432 Pfam AP2 domain 196 245 IPR001471 GO:0003700|GO:0006355
Bisa03g3268 432 PRINTS Ethylene responsive element binding protein signature 197 208 IPR001471 GO:0003700|GO:0006355
Bisa03g3268 432 PRINTS Ethylene responsive element binding protein signature 219 235 IPR001471 GO:0003700|GO:0006355
Bisa03g3268 432 PANTHER DNA-BINDING DOMAIN 165 345 IPR044808 GO:0003700|GO:0009873
Bisa03g3268 432 MobiDBLite consensus disorder prediction 173 199 - -
Bisa03g3268 432 MobiDBLite consensus disorder prediction 358 432 - -
Bisa03g3268 432 ProSiteProfiles AP2/ERF domain profile. 196 253 IPR001471 GO:0003700|GO:0006355
Bisa03g3268 432 Gene3D AP2/ERF domain 195 255 IPR036955 GO:0003700|GO:0006355
Bisa03g3268 432 MobiDBLite consensus disorder prediction 15 43 - -
Bisa03g3268 432 SUPERFAMILY DNA-binding domain 196 254 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3268 Bisa-ChrBisa03 58222410 58224364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3268 188 343 AP2-EREBP Transcription Factor Family AT5G50080 53.205 2.89e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g3268 AP2 8.6e-15 CL0081