Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3258 ATGAATAACACCTCCCAGGCTGTCGTCGCCGCCGCCGCCAGCTTCTTTGTCATCACCCTTCTCTTCGCCGTCATGGCCCTCGCCTGCAAAAGAAACAAGATCTCGCCACGTCAGCGCCAGATCCGTACCCGGCCCCCTAATACTTCCCAACCGGACCTCTCTTCCATCACCCTTGACACCAGCTGGTCCTTCGACCCCTACGTCCAGATCTCCATGGATGAGATCACCAAGGCCACCAAGAACTTCTCGCCGGATCTGATCATCGGCGACGGCAGTTTCGGCCTCGTCTACAAGGCGCGTCTATCCAACGGCCTCGTCGTCGCCATCAAGAAGCTCTCGCCGGACGCCTTCCAAGGGTTTCGTGAATTTCGCGCCGAGATGGAAACTTTAGGGAAGCTTCGACATCCGAATATCGTGAAGATTCTCGGGTATTGGGCTTCGGGTGCCGAGAGAATGTTGGTCTACGAGTTCATCGAGAGAGGGAATCTCGATCAGTGGCTTCAAGACCCGACGACGTCGTCGTCGCTCGGATACGACGAAGTTTCCATGGTGCGGGTCCCGTTATCCTGGGAGATGAGGGTGAAGATCATTAGGGGTGTGGCGAATGGGCTGCAGTACTTACATGGGCTGGACAAGCCCATTATTCATCGGGACATAAAGGCCAGCAATGTGTTGTTAGACTGTAACTTTGAGGCCCATATTGCTGATTTTGGGCTTGCGAGGAGCATTGATACTTCACACTCTCATGTGTCCACACAATTCGCGGGAACCATGGGGTACATGCCCCCAGAGTGCAGAGATGGTGTGAACGTGGCTAATGTGAAGGTGGACGTGTACAGTTTTGGGGTTTTGATGCTGGAAACTGCGACGGGCCAGCGGCCCAATCTGGCGGTGAAATTTCAAAACAAGGATGTTGGGCTTGTGGAATGGGCCAGCAAAATGGTGGCCCAAAATGCCCAAATGGAGATGGTTGATGCCAATATATCAAGGGAAGGGTTAAGTGAAGCAAATGTGAAGGAGTACTTTAAGATTGCCTGTATGTGCACGAGTGACTTACAGAAACATAGGCCTGTAATGCCTCAGATTGTGGAAATGTTGGAGAAGATGCCGGAGTAA 1116 0.5278 MNNTSQAVVAAAASFFVITLLFAVMALACKRNKISPRQRQIRTRPPNTSQPDLSSITLDTSWSFDPYVQISMDEITKATKNFSPDLIIGDGSFGLVYKARLSNGLVVAIKKLSPDAFQGFREFRAEMETLGKLRHPNIVKILGYWASGAERMLVYEFIERGNLDQWLQDPTTSSSLGYDEVSMVRVPLSWEMRVKIIRGVANGLQYLHGLDKPIIHRDIKASNVLLDCNFEAHIADFGLARSIDTSHSHVSTQFAGTMGYMPPECRDGVNVANVKVDVYSFGVLMLETATGQRPNLAVKFQNKDVGLVEWASKMVAQNAQMEMVDANISREGLSEANVKEYFKIACMCTSDLQKHRPVMPQIVEMLEKMPE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3258 371 Gene3D Phosphorylase Kinase; domain 1 48 157 - -
Bisa03g3258 371 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 369 - -
Bisa03g3258 371 ProSitePatterns Protein kinases ATP-binding region signature. 88 111 IPR017441 GO:0005524
Bisa03g3258 371 SMART serkin_6 82 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3258 371 Pfam Protein tyrosine and serine/threonine kinase 88 366 IPR001245 GO:0004672|GO:0006468
Bisa03g3258 371 Gene3D Transferase(Phosphotransferase) domain 1 158 370 - -
Bisa03g3258 371 ProSiteProfiles Protein kinase domain profile. 82 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3258 371 CDD STKc_IRAK 88 369 - -
Bisa03g3258 371 FunFam Phytosulfokine receptor 2 43 157 - -
Bisa03g3258 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Bisa03g3258 371 SUPERFAMILY Protein kinase-like (PK-like) 62 367 IPR011009 -
Bisa03g3258 371 FunFam Phytosulfokine receptor 2 158 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3258 Bisa-ChrBisa03 57967481 57968596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3258 66 369 Receptor kinase-like Gene Family AT5G07280 44.444 2.04e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bisa03g3258 PK_Tyr_Ser-Thr 1.4e-44 CL0016