Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3251 ATGCTCTACGTCTTCTCTCTGCTCTGCATTGCGCACTGGAGATTCGCCACCGTCTCTGCTCTACATCTTCTTTACTGCTCTCTCTCTAAGGCTGGTCTTGCCAGTCACCATCACTCACGAGCTATCTTCTGCCTCTCCCTTCGCATTCTGCAAAACCACATGTACTTCCAGAATTTTGGAGATGTGGTGGAAGCAGAGATAATGATGGATCGGACCACAGGGCATGCCCATGGTTTCAGATTCATTGTTTTCATTGATCACTCTGTTGCTGAACGTGTTGTTATGGAAAAGCATGCCATAGATGGTAGAACTTTTTGGAAAAAGAGTCATCAGTTACTGATTATGGAAGATGGAAATCTGGAGTTCAGTGTGAAGAAAAAAAGGGCGTCCCTAGAGATGACCAGAATATTTTCAACAGAAGCAACACACAACATTCATGGTTTGCCTGATCCTAACTGCACAAAGAAGATATTTGTTGGAGGCCTTGCATCCACAGTTTCTGAGAGTGACTTTAAGGAGTACTTTGATCAATTTGGAACAATTACAGATGTTATTGTGATGTATGACCATAACACTCAAAGGCCAAGAGGTTTTGGATTCATCAATGACTACTGA 615 0.4276 MLYVFSLLCIAHWRFATVSALHLLYCSLSKAGLASHHHSRAIFCLSLRILQNHMYFQNFGDVVEAEIMMDRTTGHAHGFRFIVFIDHSVAERVVMEKHAIDGRTFWKKSHQLLIMEDGNLEFSVKKKRASLEMTRIFSTEATHNIHGLPDPNCTKKIFVGGLASTVSESDFKEYFDQFGTITDVIVMYDHNTQRPRGFGFINDY 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3251 204 Gene3D - 48 107 IPR012677 -
Bisa03g3251 204 SUPERFAMILY RNA-binding domain, RBD 55 104 IPR035979 GO:0003676
Bisa03g3251 204 SUPERFAMILY RNA-binding domain, RBD 148 201 IPR035979 GO:0003676
Bisa03g3251 204 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 55 119 IPR000504 GO:0003723
Bisa03g3251 204 PANTHER RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 54 201 - -
Bisa03g3251 204 Gene3D - 153 203 IPR012677 -
Bisa03g3251 204 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 54 96 IPR000504 GO:0003723
Bisa03g3251 204 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 157 202 IPR000504 GO:0003723
Bisa03g3251 204 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 155 204 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3251 Bisa-ChrBisa03 57702007 57705730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3251 56 202 Eukaryotic Initiation Factors Gene Family AT1G22760 24.667 8.39e-07 47.0