Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3211 ATGACGGTGGCGTCGGACTCTTCTCCCGAGTGTTTCAGAAAGGTGATGGCGTCGATGCCAGGGTTTCGATTCCATCCGACGGATGAGGAACTGGTCATGTATTATCTGAAGAGGAAGATGTCCAGAAAGAAGCTGAAGCTCGACGTAATTCACGAGACCGATGTCTACAAGTGGGACCCTGAGGAATTGCCTGGGCAATCAGTGCTGAAAACTGGAGATAGACAATGGTTCTTTTTCAGCCCTAGAGATAGGAAGTATCCTAATAGTGGAAGAACTAATCGAGCAACAGGACATGGGTACTGGAAAGTGACAGGAAAGGATCGTAGTGTGACATACAATTCTCGGACAGTTGGAGTGAAAAAGACGCTGGTTTTCTATAGAGGTAAAGCACCAAATGGAGAACGAACTGATTGGGTTATGCATGAGTACACCTTGGAAGAAGAAGAGCTTAATAGATGCCCGGGTTTTAAGGACTATTATGCACTTTACAAGGCGTACAAGAAAAGTGGACCTGGTCCTAAAAACGGGGAACAGTATGGTGCACCATTTAAAGAAGAAGAGTGGGAGAATGACTTAGAAAATTTTAATACTAACACAGTTGATGGGGAGGTTCCAATTTCACAACTTGATGAGGGTACACCTGTTGATACTGTCAGCTTTAATGGTCAAGTGCAGCCTGAGCCTCTGGTTGATGATGAAATTGATGAGATATTGAAAAAAATGATGGATGAGCATGTTCCTGACCAGCCAACACCTTATCCTGCCCTACCTCAGGTTGCTACTGAAGAAACTGAGAGTACCGTGGTGGATCAATTCTCTAGAGATGTGATGTTTGCAGAGCCATTCAAAATGTTTCATTCAAGTGGTCAGCAATGTGATGTGCAGCAGAGCTATGACCTCACTCAGTCAGCTACCTCTCACTTAAATGTTCCCGAAGCACCTGAGGTCACTTCTGCTCCCAACATTCAAGTAGAAGAGCCTCACTTTTATGAGGATGACTTCTTGGAAATTGATGATCTCCTTAGTCCTGAACCAGCATTGTCCAACATAGAAAATCCTTTGGAGAACCTGCAGTTTGAAGATGGATTAAGTGAATTTGACTTGTTCCATGATGCAGAGATGTTTTTACGTGACATGGGACATATTGGTCAGGAGACTGTTTCACATTCATATATGAATACTTTGGACGGTAACATTGTAGACGAACATCATCAATCACCGCCCGTTGGAGAGCATGCAAATCAAACTGGTGGTGAACTATGGCATGGTCAGAGACACATCCTGAGTCCAGCGGAACACACTAACAGTTCTTTCTCTCCACCAACCTCAGGTGTCGTTAATGAATCTGCCGGCTTGCCTTATGAAGGCAATCATAATCAAAGAAGCCGGGTGAGAGATGTTGGTACAAGTAGATTCTCTTCTGCTCTCTGGGCTTTTGTTGATTCTATACCTACCACTCCTGCATCAGCGGCCGAAAATGCGAATCGGGCTCTTGAGCGGATGTCTAGCTTTGGTAGGGTGAGAATTAATATGAAGCAGGCAAACACTGCTACTGCAGGTAATGATACTACCACTATGAAGAGAGCAGGCAGAAGAAAGGGATTTTGTTTCCTTTTCTTCCCGGTTCTTGTTGTTTTATGTGCTTTTTTGTGGGTTTCTATGGGAACGTTGAGACTATTTGGGAGATGGATCCCCTGA 1698 0.4429 MTVASDSSPECFRKVMASMPGFRFHPTDEELVMYYLKRKMSRKKLKLDVIHETDVYKWDPEELPGQSVLKTGDRQWFFFSPRDRKYPNSGRTNRATGHGYWKVTGKDRSVTYNSRTVGVKKTLVFYRGKAPNGERTDWVMHEYTLEEEELNRCPGFKDYYALYKAYKKSGPGPKNGEQYGAPFKEEEWENDLENFNTNTVDGEVPISQLDEGTPVDTVSFNGQVQPEPLVDDEIDEILKKMMDEHVPDQPTPYPALPQVATEETESTVVDQFSRDVMFAEPFKMFHSSGQQCDVQQSYDLTQSATSHLNVPEAPEVTSAPNIQVEEPHFYEDDFLEIDDLLSPEPALSNIENPLENLQFEDGLSEFDLFHDAEMFLRDMGHIGQETVSHSYMNTLDGNIVDEHHQSPPVGEHANQTGGELWHGQRHILSPAEHTNSSFSPPTSGVVNESAGLPYEGNHNQRSRVRDVGTSRFSSALWAFVDSIPTTPASAAENANRALERMSSFGRVRINMKQANTATAGNDTTTMKRAGRRKGFCFLFFPVLVVLCAFLWVSMGTLRLFGRWIP 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3211 565 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Bisa03g3211 565 SUPERFAMILY NAC domain 15 168 IPR036093 GO:0003677|GO:0006355
Bisa03g3211 565 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Bisa03g3211 565 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 273 - -
Bisa03g3211 565 FunFam Nac domain-containing protein 86 27 171 - -
Bisa03g3211 565 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3211 Bisa-ChrBisa03 56419156 56422660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3211 5 562 NAC Transcription Factor Family AT1G34190 44.426 6.34e-145 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa03g3211 NAM 2e-36 No_clan