Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3163 ATGGCCCTGTGGGATCTCAACGTCGAAATGGAAGAAGATTCTGGTTCCGGGGGGACGTCGAACTCGACCCTGGTGAATTTGGAAGAATCCCGGGACGAAGATTCCTCCTCCTTCGTCGTCTTCGACATACTGAAGAGGGAAACAGAGTCGCCGGAAGTCAGGACCAGGGCTCTGTTCCCTGCTGACAGAGAGGGTGAGTTCAAGCTGGGGTCGTCGTCGGCGGCGGCGGCGTGCTCGAGGAGAAGCCAATGGCTGAACCTAAGTGAGGGAGGCGTCGGCGGCGGCGGCGAGATGAGGATTTCGCAGGGGAAGCAACCGCAAATCAGGAAGAGTAGGAGAGGACCGAGGTCCAGAAGCTCGCAGTACAGAGGGGTTACCTTTTATCGCAGGACTGGAAGATGGGAGTCACATATATGGGATTGTGGGAAGCAGGTCTATTTAGGCGGATTTGACACGGCACATTCTGCAGCAAGAGCATACGATCGTGCTGCAATAAAGTTCAGAGGAGTGAATGCTGATATAAACTTCAATTTGAGTGATTACGAGGATGAGTTGAAGCAGATGTGGAGTTTGAGTAAAGAGGAGTTTGTGAAAGTGCTTCGTCGCCGATGCTCTGGCATCCCCAGAGGGAGCTCGAAATACAGAGGTTTATCCCTCGAAAAGTGGGGTCAATGGGAAGCACGAATTAGCCCCTTCCTTGGCAAAAAGACTTATGAGAAGCTACCCATTAAGTCTGAAGGAAGAGAATTGATTACCAGCTTTGGGGCCACCACCTGTAAGGGAGAAAAAGCTGTTGAGTCTAGCAGAGAAGTAAATTCAGGCAATTCTCACAATCTTGATTTGAGCCTCGGAATTTCTCCACCTTCTAACGAATCCAAGAAGAATGATGCTGGAAGAGACTATTGTTTTCGTTATTCGTCCTCTGATATATCCAACAGAATAGGCCCAATGGTTGATAGCACTGGTAATGCACTGATGAGGGGACAAGCCATTTATGGTGTAGCAATGACTTCAAAATATGATCAGATTTGCTCTGCTTTATGTCCTGCTTTTGTACACAACTATGAGGAGAAGAAGGCCATCGAAAAGAGAATGAAAGCCATTCCTTTCCCGCGACTCTCAACCTCGGCGTGGCAATTTCCCGGCAACGGCACCGGCACAGGCACCGGCACCGTCGTGCCGGTGCCAACACTCCTGAATGCAGCATCATCAAAATTCAGTTCTTGGAGCAACAATGATCCAGCAGCCTCACATCCAATCAATCCTCACGACAATTCTATCCGCAATTGTACAACCCTAGCATCCACCATTAACTCCCATGTTGACAGAGTGTGA 1335 0.4959 MALWDLNVEMEEDSGSGGTSNSTLVNLEESRDEDSSSFVVFDILKRETESPEVRTRALFPADREGEFKLGSSSAAAACSRRSQWLNLSEGGVGGGGEMRISQGKQPQIRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHSAARAYDRAAIKFRGVNADINFNLSDYEDELKQMWSLSKEEFVKVLRRRCSGIPRGSSKYRGLSLEKWGQWEARISPFLGKKTYEKLPIKSEGRELITSFGATTCKGEKAVESSREVNSGNSHNLDLSLGISPPSNESKKNDAGRDYCFRYSSSDISNRIGPMVDSTGNALMRGQAIYGVAMTSKYDQICSALCPAFVHNYEEKKAIEKRMKAIPFPRLSTSAWQFPGNGTGTGTGTVVPVPTLLNAASSKFSSWSNNDPAASHPINPHDNSIRNCTTLASTINSHVDRV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3163 444 MobiDBLite consensus disorder prediction 9 29 - -
Bisa03g3163 444 Pfam AP2 domain 121 169 IPR001471 GO:0003700|GO:0006355
Bisa03g3163 444 Gene3D AP2/ERF domain 120 179 IPR036955 GO:0003700|GO:0006355
Bisa03g3163 444 ProSiteProfiles AP2/ERF domain profile. 121 177 IPR001471 GO:0003700|GO:0006355
Bisa03g3163 444 FunFam AP2-like ethylene-responsive transcription factor 120 179 - -
Bisa03g3163 444 SMART rav1_2 121 183 IPR001471 GO:0003700|GO:0006355
Bisa03g3163 444 MobiDBLite consensus disorder prediction 268 292 - -
Bisa03g3163 444 MobiDBLite consensus disorder prediction 265 296 - -
Bisa03g3163 444 CDD AP2 121 179 IPR001471 GO:0003700|GO:0006355
Bisa03g3163 444 MobiDBLite consensus disorder prediction 93 121 - -
Bisa03g3163 444 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 76 284 - -
Bisa03g3163 444 SUPERFAMILY DNA-binding domain 120 178 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3163 Bisa-ChrBisa03 55149866 55154296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3163 100 286 AP2-EREBP Transcription Factor Family AT4G36920 62.871 1.50e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g3163 AP2 3.8e-10 CL0081