Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3156 ATGCCAGAGATGACCACCACCAACAGCAACAGCAACAACGTTGGCCTCAATGGTCAGTTTGGGGACACCACGCTGACCAAGGTGTTTGTTGGAGGACTCGCCTGGGAGACTCAAAAGGAGGCCATGCGAGAGCATTTCCAGAAGTACGGCGAGATCCTCGAGGCCGTCATTATCTCCGATAAGGCCACCGGCAGATCCAAGGGCTACGGCTTCGTGACGTTCAAGGAAGCGGAGGCTGCTAAGAAGGCTTGCGAGGATCCCACGCCGATCATCAATGGACGCCGAGCCAACTGCAATCTAGCTTCGCTCGGCGCGCGCCGACCCAAGTCCAACAACGCCTCATCGCCTCCTCAACAACAAGGATCGAACGGTGGAGGACCAAGGAATGCCTCAAGCGTACCAGCCCCACCAGCCAATCACGTTCAGTGGTATTATCCTGTGGGTACACCTGCTTCTCATTTCCATCATCACAACCATCAGCCTGTTCCTTTATATGGGTACACCCCGACCTACATTGCAGCTGACATAAATTACAATCAGAAGCTAGGCTACACCGGAGCTGGGCCATACATGAACGGTTATTATTCGCATATGTACCCGAGCCAGGCTATGGTAGGTGGGAACACATTGATGCCGATGTACCCTCTTTACCAGTACCATCAAACGCACACGATGGGCCTTCCCGCCCACATCTTTCAGCCAACAACAGCTGGGCACGTGGCCATCATGTCGAAACCCGCGTCCGTCACTCCTAATACAGGTATGTCACATGATAACACGCCAACAATCCCCAGTCAATGTGTCTGTAAGCAGCAACACGAATCATTGTGGTCACGTGACCTTGTGATCGTGATTGAGATTTCAGTCTAG 870 0.531 MPEMTTTNSNSNNVGLNGQFGDTTLTKVFVGGLAWETQKEAMREHFQKYGEILEAVIISDKATGRSKGYGFVTFKEAEAAKKACEDPTPIINGRRANCNLASLGARRPKSNNASSPPQQQGSNGGGPRNASSVPAPPANHVQWYYPVGTPASHFHHHNHQPVPLYGYTPTYIAADINYNQKLGYTGAGPYMNGYYSHMYPSQAMVGGNTLMPMYPLYQYHQTHTMGLPAHIFQPTTAGHVAIMSKPASVTPNTGMSHDNTPTIPSQCVCKQQHESLWSRDLVIVIEISV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3156 289 Gene3D - 9 133 IPR012677 -
Bisa03g3156 289 SMART rrm1_1 27 99 IPR000504 GO:0003723
Bisa03g3156 289 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 26 103 IPR000504 GO:0003723
Bisa03g3156 289 MobiDBLite consensus disorder prediction 105 135 - -
Bisa03g3156 289 FunFam Putative RNA-binding protein ARP1 20 108 - -
Bisa03g3156 289 MobiDBLite consensus disorder prediction 105 129 - -
Bisa03g3156 289 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 28 85 IPR000504 GO:0003723
Bisa03g3156 289 CDD RRM_RBM24_RBM38_like 26 101 - -
Bisa03g3156 289 PANTHER BOULE-RELATED 6 255 - -
Bisa03g3156 289 SUPERFAMILY RNA-binding domain, RBD 23 128 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3156 Bisa-ChrBisa03 54935497 54937970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3156 22 102 C2H2 Transcription Factor Family AT2G19380 43.210 2.24e-16 77.4