Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3151 ATGGAGCAGCAACACGAAGAGCATGAGGTGTACGGAGGAGATATTCCCGACGAGGCGGAGATGGACGCAGATTATGGAGTAGAAGATGAAGGAGACGGAGACGGAGAAGGAGAAGGACTCCATGACTCTGATCACCCAAATAAGGACCTGGAAGACATGAAGAAGAGACTCAAGGAAATTGAGGATGAAGCTAGTGCCCTTCGCGAGATGCAGGCTAAGGTTGAGAAAGAGATGGGTGTTGTTCAAGATTCATCTGGTTCTTCTGCAAGTCAAGCTGAAAAGGAGGAAGTAGATTCCCGATCAATCTACGTTGGTAATGTTGACTATGGATGTACTCCTGAAGAAGTTCAACAGCATTTTCAGTCATGTGGTACTGTGAACAGAGTAACGATATTGACAGACAAATTTGGTCAACCAAAAGGATTTGCTTATGTTGAGTTTGTTGAAATTGATGCTGTTCAGAATGCTCTCTTGTTGAATGAATCAGAATTGCATGGTCGACAATTGAAGGTCTCTGCTAAGCGCACAAATCTTCCTGGAATGAAACAGTATCGCGGTAGAAGACCTATGGGTTTCCGACCTAGAATGCCTTTCATGCCTTCTCCGTATGGTTATGGAAGGTTTCCAAGGTATAGGCGTCCAATGCGGTACAGGCCATACTAG 663 0.4495 MEQQHEEHEVYGGDIPDEAEMDADYGVEDEGDGDGEGEGLHDSDHPNKDLEDMKKRLKEIEDEASALREMQAKVEKEMGVVQDSSGSSASQAEKEEVDSRSIYVGNVDYGCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNLPGMKQYRGRRPMGFRPRMPFMPSPYGYGRFPRYRRPMRYRPY 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3151 220 Coils Coil 47 77 - -
Bisa03g3151 220 MobiDBLite consensus disorder prediction 1 15 - -
Bisa03g3151 220 MobiDBLite consensus disorder prediction 38 76 - -
Bisa03g3151 220 SUPERFAMILY RNA-binding domain, RBD 90 203 IPR035979 GO:0003676
Bisa03g3151 220 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 100 176 IPR000504 GO:0003723
Bisa03g3151 220 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 7 204 - -
Bisa03g3151 220 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 102 170 IPR000504 GO:0003723
Bisa03g3151 220 Gene3D - 21 182 IPR012677 -
Bisa03g3151 220 MobiDBLite consensus disorder prediction 1 98 - -
Bisa03g3151 220 CDD RRM_II_PABPs 101 172 - -
Bisa03g3151 220 SMART rrm1_1 101 172 IPR000504 GO:0003723
Bisa03g3151 220 MobiDBLite consensus disorder prediction 16 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3151 Bisa-ChrBisa03 54699397 54704736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3151 101 172 Eukaryotic Initiation Factors Gene Family AT2G36660 36.842 2.21e-09 55.1