Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3145 ATGACCACAAAAGTCATCATTATTCAGGTGGCCCTCGCGGCGGCTCTCCTTGCGGCCACCGCCATCCTCTCCGATGACACTGCCCTGATTCCCGAAGACAAGTCCCAACTCGAGAAATGGTTCAACGACAACATCGGGCCGTTGTCACAGCGCGCAAAAACTCTAGACCCAGCACTCGTTGCTGCAGATAATATTAATGGTGGGAAGGTGGTGAAGGTGATGCAAGATGGAAGTGGAGATTTCAAGACTGTGACTGATGCCATTAACAGTATCCCTAGTGGGAACACAAATCGAGTGATTGTGTACATTGGAGGAGGGACTTACTTTGAGAAGATGAGGATTAATAGAACAAAGCCTTTTGTGACGTTGTATGGGGATCCTAAGAACTGGCCAATCTTGACATATAATGGCACTGCAGCTCAATACGGCACCGTTGATAGTGCTTCCTTGATCGTTGAGTCAGATTACTTTGTAGCGGTCAATATCATCTTTTCGAATTCGGCACCAAGGCCGGGTCCAGACACAAAGGGTGCCCAGGCAGTGGCGTTGAGGATTTCCGGTGACAAGGCGGCGTTCTACAATTGCAGGTTTGAAGGATTTCAGGACACTCTTTGTGATGACAGGGGCAAGCATTTCTTCAAAGATTGCACCATTCAAGGCACAGTGGATTTCATTTTTGGAAGTGGAAAATCACTCTATTTGAACAATAAATTGGTGGCAGTTGGGAATGGAACAATAGCTGCACAAGCAAGAGTCAGCGACTTCGAGGACATTGCGTTTTCGTTTGTGCACTGCGATGTGAGTGGGAGTGAGATTGCCAAGGAAACGTTCTTGGCGAGACCGTGGACGCCACGCCCCAAAGTTGTGTACGCTTACACCATAATGGGCACCATTTTGAACCCTCTCGGTTGGAGTGACAACAGCCAGCCCAGTAATGACCCAAATCTATATTTCGGAGAGTACAAAAACAAAGGTCCACGTTCCGACCCCAATGGTCGTGCAAAATTCACCAAGATGCTAAGCGACTCAGAGGCTGGTCCTTTCTTAAACCTTGGCTTCATTCAGGCTTCCACCTGGCTGCTTCCTCCTCCTACCCCAAAAATTTAA 1107 0.4815 MTTKVIIIQVALAAALLAATAILSDDTALIPEDKSQLEKWFNDNIGPLSQRAKTLDPALVAADNINGGKVVKVMQDGSGDFKTVTDAINSIPSGNTNRVIVYIGGGTYFEKMRINRTKPFVTLYGDPKNWPILTYNGTAAQYGTVDSASLIVESDYFVAVNIIFSNSAPRPGPDTKGAQAVALRISGDKAAFYNCRFEGFQDTLCDDRGKHFFKDCTIQGTVDFIFGSGKSLYLNNKLVAVGNGTIAAQARVSDFEDIAFSFVHCDVSGSEIAKETFLARPWTPRPKVVYAYTIMGTILNPLGWSDNSQPSNDPNLYFGEYKNKGPRSDPNGRAKFTKMLSDSEAGPFLNLGFIQASTWLLPPPTPKI 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3145 368 Gene3D - 67 363 IPR012334 -
Bisa03g3145 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 65 360 - -
Bisa03g3145 368 FunFam Pectinesterase 66 362 - -
Bisa03g3145 368 Pfam Pectinesterase 71 356 IPR000070 GO:0030599|GO:0042545
Bisa03g3145 368 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Bisa03g3145 368 SUPERFAMILY Pectin lyase-like 70 362 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3145 Bisa-ChrBisa03 54498310 54502031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3145 22 364 Carbohydrate Esterase AT1G69940 55.362 1.41e-135 389