Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3144 ATGACCACAAAAGTCATCATTATTCAGGTGGCCCTTGCGGCGGCCCTCCTTGCCACTACCGCCGTCCTCTCCGATGACACCGCCTCGATTCCCGAAGACAAGTCCCAACTCGAGAAATGGTTCAACAACAATGTCGAGCCATTGACACAGCGTGCGAAAACCTTAGAGTCAGCACTCATTGCTGCAGAGAATAATGGCGGGAAGGTGGTGAAGGTGATACAGGATGGAAGTGGGGATTTCAAGACTGTGACAGACGCCATTAATAGTATCCCTAATGGGAACACAAATCGAGTGATTGTGTACATTGGAGGAGGGACTTACTTTGAGAAGATGAGGATTAATAGAACAAAGCCTTTTGTGACGTTGTATGGGGATCCTAAGAACTGGCCAATCTTGACATATAATGGCACTGCAGCTCAATACGGCACCATTGATAGTGCTTCCTTGATCGTTGAGTCAGATTACTTTGTGGCAGTCAATGTCATCTTTTCGAATTCTGCACCGAGGCCGGGTCCACCAACAAAGGGTGCTCAGGCGGTGGCGTTGAGGATTTCCGGTGACAAGGCAGCGTTCTACAATTGCAGGTTTGAAGGATTTCAGGACACTCTTTGTGATGACAGGGGCAAGCATTTCTTCAAAGATTGCACCATTCAAGGCACAGTGGATTTCATTTTTGGAAGTGGAAAATCACTCTATTTGAACAATAAAGTGGTGGCAGTTGGGAATGGAGTGATTGCTGCACAAGCAAGAGCCAACGACTTCGACGACATTGCGTTTTCGTTTGTGCACTGCGATGTGAGTGGGAGTGAGAATGCCAACGAAACGTTCCTGGGGAGACCGTGGATGCCAGGTCCCATAATTGTGTACGCTTACACAATAATGAGCAGCATTTTGAACCCCCATGGTTGGAGTGACAATAGCCAGCCCAGTAATGACACAAATCTATATTTCGGAGAGTACAAAAACAAAGGTCCACGTTCCGACCCCAGTGGTCGTGCAAAATTCACGAAGATGCTAAGCGACTCAGAGGCTGGTCCTTTCTTAAACCTTGGCTTCATTGAGGCCTCCACTTGGCTGCTGCCTCCTCCTACACCAAAAATTTAA 1104 0.4764 MTTKVIIIQVALAAALLATTAVLSDDTASIPEDKSQLEKWFNNNVEPLTQRAKTLESALIAAENNGGKVVKVIQDGSGDFKTVTDAINSIPNGNTNRVIVYIGGGTYFEKMRINRTKPFVTLYGDPKNWPILTYNGTAAQYGTIDSASLIVESDYFVAVNVIFSNSAPRPGPPTKGAQAVALRISGDKAAFYNCRFEGFQDTLCDDRGKHFFKDCTIQGTVDFIFGSGKSLYLNNKVVAVGNGVIAAQARANDFDDIAFSFVHCDVSGSENANETFLGRPWMPGPIIVYAYTIMSSILNPHGWSDNSQPSNDTNLYFGEYKNKGPRSDPSGRAKFTKMLSDSEAGPFLNLGFIEASTWLLPPPTPKI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3144 367 ProSitePatterns Pectinesterase signature 2. 217 226 IPR033131 -
Bisa03g3144 367 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 61 359 - -
Bisa03g3144 367 Gene3D - 65 362 IPR012334 -
Bisa03g3144 367 FunFam Pectinesterase 65 361 - -
Bisa03g3144 367 SUPERFAMILY Pectin lyase-like 69 361 IPR011050 -
Bisa03g3144 367 Pfam Pectinesterase 70 354 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3144 Bisa-ChrBisa03 54466146 54469792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3144 16 363 Carbohydrate Esterase AT1G69940 53.429 1.36e-133 384