Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3143 ATGGCCCTTGCAGCTACTCTCCTTGCCGCCGCCATTGTCCTCTCAGATGACACCGCCCCGATTCCCGAAGACAAGTCCCAACTCGAGAAATGGTTCAACGACAACGTCGGGCCGTTTTCACAGAGAGGAAAAATCCTAGACCCAGCACTCGTTGCTGCAGAGAATAATGGCGGGAATGTGGTGAAGGTGATGCAGGATGGAAATGGAGATTTCAAGACTGTGACAGACGCCATTAATAGTATCCCTAATGGGAACACAAATCGAGTGATTGTGTACATTGGAGGAGGGACTTACTTTGAGAAGATGAGGATTAATAGAACAAAGCCTTTTGTGACGTTGTATGGGGATCCTAAGAACTGGCCAATCTTGACGTATAATGCCACTGCACTTAATTATGGCACCACTGGTAGTGCTTCGTTGATTGTTGAGTCGGATTACTTCGTGGCGGTCAATATCATCTTTTCGAATTCTGCACCGAGGCCGGGTCCACCAACAAAGGGTGCTCAGGCGGTGGCGTTGAGGATTTCCGGTGACAAGGCGGCGTTCTACAATTGCAGGTTTGAAGGATTTCAGGACACTCTTTGTGATGACAGGGGCAAGCATTTCTTCAAAGATTGCACCATTCAAGGCACAGTGGATTTCATTTTTGGAAGTGGAAAATCACTCTATTTGAACAACAATTTGGTGGCAGTTGGGAATGGAGTGATAGCTGCAGAAGCAAGAGTCAACGACTTCGACGACATGGCGTTTTCGTTTGTGCACTGCAATGTGAGTGGGAGTGAGATGGCCAAGGAAACGTTCTTGGGGAGACCATGGAAGCCACGCCCCAAAGTTGTGTACGCTTACACCATAATGGGCAACATTTTGAACCCTCTCGGTTGGAGTGACAACAGCAAGCCCGAAATTGACAAAGATCTATATTTCGGAGAGTACAAAAACAGCGGTCCACGTTCCGACCCCAAAGGTCGTGCAAAATTCACCAAGATGCTAAGCAACTCAGAGGCTGGTCCTTTCTTAAACCTTGGCTTCATTCAGGCTTCCACCTGGCTGCTTCCTCCTCCTACCCCAAAAATATAA 1077 0.4791 MALAATLLAAAIVLSDDTAPIPEDKSQLEKWFNDNVGPFSQRGKILDPALVAAENNGGNVVKVMQDGNGDFKTVTDAINSIPNGNTNRVIVYIGGGTYFEKMRINRTKPFVTLYGDPKNWPILTYNATALNYGTTGSASLIVESDYFVAVNIIFSNSAPRPGPPTKGAQAVALRISGDKAAFYNCRFEGFQDTLCDDRGKHFFKDCTIQGTVDFIFGSGKSLYLNNNLVAVGNGVIAAEARVNDFDDMAFSFVHCNVSGSEMAKETFLGRPWKPRPKVVYAYTIMGNILNPLGWSDNSKPEIDKDLYFGEYKNSGPRSDPKGRAKFTKMLSNSEAGPFLNLGFIQASTWLLPPPTPKI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3143 358 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 53 350 - -
Bisa03g3143 358 SUPERFAMILY Pectin lyase-like 60 352 IPR011050 -
Bisa03g3143 358 ProSitePatterns Pectinesterase signature 2. 208 217 IPR033131 -
Bisa03g3143 358 FunFam Pectinesterase 56 352 - -
Bisa03g3143 358 Gene3D - 57 353 IPR012334 -
Bisa03g3143 358 Pfam Pectinesterase 61 346 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3143 Bisa-ChrBisa03 54425968 54429943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3143 7 354 Carbohydrate Esterase AT1G69940 54.571 9.36e-133 382