Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3142 ATGACCACAAAAGTCATCATTATTCAGGTGGCCCTCACAGCGGCTCTCCTTGCCGCCACCGCGGTCCTCTCCGATAACACATCCCCGATTCCCGAAGACAAGTTCCAACTCGAGAAATGGTTCAACGACAACGTCGGGCCATTGTCACAGCGCGCGACAACCCTAGACCCAACACTCGTTGCTGCGGAGAATAAAGGCGAGAAGGTGGTGAAGGTGATGCAGGACGGAAGTGGAGATTTTAAGACTATGACAGACGCCATTAATAGTATCCCTAATGGGAACACAAATCGAGTGATTGTGTACATTGGAGGAGGGACTTACTTTGAGAAGATGAGGATTAATAGAACAAAGCCTTTTGTGACGTTATATGGGGATCCTAAGAACTGGCCAATCTTGACGTATAATGCCACTGCGCTTCATTACGTTGATAGTGCTTCCTTGATTGTTGAGTCGGATTACTTTGTGGCGGTCAATATCATCTTTTCGAATTCGGCACCAAGGCCGGGTCCAGACACAAAGGGTGCCCAGGCGGTGGCGTTGAGGATTTCCGGTGACAAGGCGGCGTTCTACAATTGCAGGTTTGAAGGATTTCAGGACACTCTTTGTGATGACAGGGGCAAGCATTTCTTCAAAGATTGCACCATTCAAGGCACAGTGGATTTCATTTTTGGAAGTGGAAAATCACTCTATTTGAACAACAATTTGGTGGCAGTTGGGAATGGAGTGATAGCTGCAGAAGCAAGAGTCAACGACTTCGACGACATGGCGTTTTCGTTTGTGCACTGCAATGTGAGTGGGAGTGAGATGGCCAACGAAACGTTCTTGGGGAGACCATGGAAGCCACGCCCCAAAGTTGTGTACGCTTACACCATAATGGGCAACATTTTGAACCCTCTCGGTTGGAGTGACAACAGCAAGCCCGAAATTGACAAAATAAGCCGCGTTTCAGCCATTCAGGTCGTCGTTGCGGCGGTGATTCTCGCCGGATCCGCCGTGTTCGCGGACGACAACGTGCCGGTCCCTGCGGACAGATCCCAACTGCAGAAATGGTTCGAAGACAACGTGAAGCCGTTATCGGCGAGAATAGGCACGATTGCGCCAGAGCTGGCGACGGCAGAGGAAGGTCAGCCGAAGATCGTGAAGGTGTCGCCAGACGGGAAAGGTGACTTCAAGACAATCACGGAGGCAATCAACAGCATCCCAAGCGGGAACACGAAGCGAGTGATTGTTAGCATCGCGAGTGGGACTTATAACGAGAAGATCACAATCGACAGAACAAAGCCGTTTGTGACTCTGATCGGGGACGCAAACAAAATGCCGACCATTACCTTCAGCGGCACTGCGAAAGTCTACGGCACCGTCGATAGCGCGACGTTGATCGCCGAAGGAGCGTACTTCGTCGCTGCGAATCTCATTATTCAGAACAATGCGCCGATGCCGGACGGCAAGATGGTGGGGGCACAGGCGGTGGCGCTCCGGTTGTCCGGCGACAACTCCGTTTTGTACAACTGCAAGCTGTTTGGATACCAGGATACGTTATGCGACGACAGGGGGCATCATCTGTTCAAGGACTGCACGATCCAGGGGACGGTGGATTTCATATTCGGGAGCGGGAAGTCGCTGTACCTGAACACGAAGCTGGTGGTGGTCGGCGACGGGGCCGGCGTGATAGCGGCGCAGGCGAGGGAGAAGGAGACAGAGGACATTGGGTACTCGTTCGTGCACTGTGACATTGAGGGAACGGCTAACGGGACGTTTCTGGGAAGGGCGTGGATGACACATGGGAAAGTGGTGTATGCTTATACCACCATGAGTAAGATCGTCAATCCTCTGGGGTGGAATATTGATAAATTTCCTCAGAATGCACAGACTGTATATTTTGGAGAGTACAAGAATACAGGAGAAAGTGGAACTCCCAAGGGACGTGCCACCTTCACAAAGCAACTCAGTGAAGCAGAAGCTAACCAATTCATCTCTCTTGGCTTTATTCAGGCGTCTAAGTGGCTTCTTCCTATGCCTACAGTCTAA 2028 0.5133 MTTKVIIIQVALTAALLAATAVLSDNTSPIPEDKFQLEKWFNDNVGPLSQRATTLDPTLVAAENKGEKVVKVMQDGSGDFKTMTDAINSIPNGNTNRVIVYIGGGTYFEKMRINRTKPFVTLYGDPKNWPILTYNATALHYVDSASLIVESDYFVAVNIIFSNSAPRPGPDTKGAQAVALRISGDKAAFYNCRFEGFQDTLCDDRGKHFFKDCTIQGTVDFIFGSGKSLYLNNNLVAVGNGVIAAEARVNDFDDMAFSFVHCNVSGSEMANETFLGRPWKPRPKVVYAYTIMGNILNPLGWSDNSKPEIDKISRVSAIQVVVAAVILAGSAVFADDNVPVPADRSQLQKWFEDNVKPLSARIGTIAPELATAEEGQPKIVKVSPDGKGDFKTITEAINSIPSGNTKRVIVSIASGTYNEKITIDRTKPFVTLIGDANKMPTITFSGTAKVYGTVDSATLIAEGAYFVAANLIIQNNAPMPDGKMVGAQAVALRLSGDNSVLYNCKLFGYQDTLCDDRGHHLFKDCTIQGTVDFIFGSGKSLYLNTKLVVVGDGAGVIAAQAREKETEDIGYSFVHCDIEGTANGTFLGRAWMTHGKVVYAYTTMSKIVNPLGWNIDKFPQNAQTVYFGEYKNTGESGTPKGRATFTKQLSEAEANQFISLGFIQASKWLLPMPTV 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3142 675 ProSitePatterns Pectinesterase signature 2. 527 536 IPR033131 -
Bisa03g3142 675 FunFam Pectinesterase 375 671 - -
Bisa03g3142 675 SUPERFAMILY Pectin lyase-like 69 306 IPR011050 -
Bisa03g3142 675 SUPERFAMILY Pectin lyase-like 378 671 IPR011050 -
Bisa03g3142 675 ProSitePatterns Pectinesterase signature 2. 215 224 IPR033131 -
Bisa03g3142 675 Gene3D - 20 319 IPR012334 -
Bisa03g3142 675 Pfam Pectinesterase 380 665 IPR000070 GO:0030599|GO:0042545
Bisa03g3142 675 Pfam Pectinesterase 70 303 IPR000070 GO:0030599|GO:0042545
Bisa03g3142 675 Gene3D - 375 673 IPR012334 -
Bisa03g3142 675 FunFam Pectinesterase 65 321 - -
Bisa03g3142 675 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 370 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3142 Bisa-ChrBisa03 54382762 54392783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3142 325 675 Carbohydrate Esterase AT1G69940 54.416 9.17e-140 411