Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3133 ATGGGTTCTGTTTGTGGTTGTTTGAGTGTTGAAAACTTTGAAGATTATGTAAATCCAAATAGTTCTGTATATAGGAATTGCATGTGCTTCAGTTGTTTCATGCAGAACTTTTTTATTGTGTATTCATCAATATTCCGTAGGCGCGAAGTGCATTCCCTTCCTTCATCTATACAGGGGGCAGCATCTATGACTTCTGCAGCGTCATTGGAAAATTCTTTATCTGACATGTATCGTTCTCCTCCACGGCCTTTACCTTATGATGCAGACCCTAGGTATTTCCTCTCACAACGTGATGGACTAGTTTCAAGACGTGAGAAGGGTTCAAGTCATTCGAATGAGGAATCACAACCTCTAAGAAGCGATCTAGATGTGGATTCAGACTCTTTAAATATGGAAGACAAATGGAATGAATGTGCCTGTGAAAATGGATCAAAAGAATACCGTTCAAAGTCCTCACTAAGACTTTCATCAACAAAATATACAACTGGAGTTGGGCTGGTTTATGCATCATCTGAAGAAGATGATATTTGTCCAACATGTCTTGAAGAATATACTGAAGAGAACCCAAAGATAATGACAAAATGCTCCCACCATTTTCATCTTGGCTGCATCTATGAGTGGATGGAGAGAAGTGAAAACTGTCCAGTCTGTGGGAAGGAGATGGAATTCGATGAAACGGCTTAA 684 0.3962 MGSVCGCLSVENFEDYVNPNSSVYRNCMCFSCFMQNFFIVYSSIFRRREVHSLPSSIQGAASMTSAASLENSLSDMYRSPPRPLPYDADPRYFLSQRDGLVSRREKGSSHSNEESQPLRSDLDVDSDSLNMEDKWNECACENGSKEYRSKSSLRLSSTKYTTGVGLVYASSEEDDICPTCLEEYTEENPKIMTKCSHHFHLGCIYEWMERSENCPVCGKEMEFDETA 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3133 227 CDD RING-H2_AIRP1-like 173 221 - -
Bisa03g3133 227 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 60 225 - -
Bisa03g3133 227 FunFam E3 ubiquitin-protein ligase At3g02290-like 154 224 - -
Bisa03g3133 227 SMART ring_2 177 217 IPR001841 -
Bisa03g3133 227 Pfam RING-H2 zinc finger domain 172 217 IPR024766 GO:0008270
Bisa03g3133 227 ProSiteProfiles Zinc finger RING-type profile. 177 217 IPR001841 -
Bisa03g3133 227 SUPERFAMILY RING/U-box 171 223 - -
Bisa03g3133 227 MobiDBLite consensus disorder prediction 103 126 - -
Bisa03g3133 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 226 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3133 Bisa-ChrBisa03 54009578 54020258 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3133 1 226 C3H Transcription Factor Family AT5G15790 59.914 2.95e-91 266