Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3125 ATGGCTAGGTCTGCGAAAGGTCAGCAAGAACAATTGGAAGACGACGATGAGGGTCACTTGACTGGAAATGGCTCTTCTTCACACAAAGTGAAGGTGGATGAAGCGACCAGGGAACAGCGGGTGAACGCACATCGTTCAAAGCATTCAGAAACTGAGCAACGTAGAAGGAGCAAGATTAATGAAAGATTTCAGATTCTGAGAGATCTCATACCTCAAAATGATCAAAAAAGAGATAAGGCTTCTTTCTTGTTGGAGGTTATAGAGTATATTCAGTTTTTACAGGAGAAGTTACAAATGTATGAGCAGTCCTACCAAGGGTGGAATCAAGAGCCAACAAAATTAATTCCTTGGAGAAATCATCGTGGTCCTGCAGAAAATTGCACACATCTTTCTCAACCTATACAAAACGGTTCTGGTCATGAGAACAATGATGTTGTATCTCCATCTCTGCCCATAAATGCACATAATACAATTGAATCTGACTTTTCATCAACAATTATGCAAAAGGCCAGTCCTCCTTGTTTAACTTCTGAAGCAGTTCCGTTGGGCATGCAAATGCGGTTGGACATGTTTGATGCAACTGTAAGCAGTGGTATGCCAACTCAACATTTGCATGAAGCAATATCTAATGCTGAGAACATGCCTTCCCATATTCAGCCTCAGATGTGTCTTGGTAGACCTAAGGAGGGCGCTTGTGATTTTCCAAATAATACCTTTAAAGAACAGGAGGAGCTAGCATTTGAAAGTGGATCAGCTAGCATCTCAAGTGCCTTTTCTCAAGGGATATTGGATACTTTAACGCAGTCGCTGCGGTCTTCAGGTGTGGATTTATCCCAGGCCAATGTTTCAGTGCAAATTGATGTTGGGAGACGATCAATTGCCTCCACATCTAGCTCAAAGGATCATGAGAAGCAATTTGTGAACAACCAAATGATGGCATGTTCAGGAGTGGATTTCTGCAGCGAGGATTCTGAACAAACTTTTAAGAGGCTCAGAACAGGAGCGAGCTAG 1011 0.4243 MARSAKGQQEQLEDDDEGHLTGNGSSSHKVKVDEATREQRVNAHRSKHSETEQRRRSKINERFQILRDLIPQNDQKRDKASFLLEVIEYIQFLQEKLQMYEQSYQGWNQEPTKLIPWRNHRGPAENCTHLSQPIQNGSGHENNDVVSPSLPINAHNTIESDFSSTIMQKASPPCLTSEAVPLGMQMRLDMFDATVSSGMPTQHLHEAISNAENMPSHIQPQMCLGRPKEGACDFPNNTFKEQEELAFESGSASISSAFSQGILDTLTQSLRSSGVDLSQANVSVQIDVGRRSIASTSSSKDHEKQFVNNQMMACSGVDFCSEDSEQTFKRLRTGAS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3125 336 Gene3D - 41 114 IPR036638 GO:0046983
Bisa03g3125 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 44 120 IPR036638 GO:0046983
Bisa03g3125 336 Pfam Helix-loop-helix DNA-binding domain 45 94 IPR011598 GO:0046983
Bisa03g3125 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 93 IPR011598 GO:0046983
Bisa03g3125 336 Coils Coil 90 110 - -
Bisa03g3125 336 MobiDBLite consensus disorder prediction 30 56 - -
Bisa03g3125 336 FunFam BHLH domain class transcription factor 41 113 - -
Bisa03g3125 336 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 2 333 IPR044295 GO:0003700|GO:0006351|GO:0046983
Bisa03g3125 336 SMART finulus 49 99 IPR011598 GO:0046983
Bisa03g3125 336 MobiDBLite consensus disorder prediction 8 22 - -
Bisa03g3125 336 CDD bHLH_AtBIM_like 42 118 - -
Bisa03g3125 336 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3125 Bisa-ChrBisa03 53837440 53843021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3125 3 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 39.604 1.20e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa03g3125 HLH 1.6e-15 No_clan