Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3123 ATGGAGAGCCAGCCGAAAGAGCAGATTAATTCCAAAAATAGAAAAGGTGCAATCTTGCCGGATAAGGGGCCTCTAGAGTTATTTGCCTGCAAGATTTGTTTGAATGTCAAGAGAGATCAAATAATGGTTCATCAAGCTGATTTAGTTATCATTGGTGTCACTGTTGGTTTGGCCTTTGGCATTTTGATAGCTTCTCTCATATTTTTCATCATAAGGTGGTACAAGAGACGTGCTCATCTTAGACGATGTGCAAATGAGCGTTCTCTTACAACACTTCCAATACGCACAAATGGATTAGGAACAAGCACTGACTTCAGTGCTTCTCTTACAAGTTCCATAACTGCTTCAGGGTTAGAAAATCTGCAGAAAAATTCCCATTTCTCTTGGTGGAATCGTAAAAAGAAAGATCAGTTTGCATCACCTTCAAGCATTTTTAGATACTCATACAAAGAAATTCAGAAAGCTACACAAAATTTCACAGCTGTCTTGGGACAAGGATCATTTGGCACAGTTTATAAAGCAACAATGCCTACAGGTGAGGTGGTAGCTGTGAAGGTGCTTGGTTCCAATTCCAAACAAGGAGAGAGAGAATTCCAAACAGAGGTGCTTTTGCTGGGAAGACTGCATCATCGAAATCTTGTGAATTTGTTAGGATATTGTGTAGATAAAGGACAGCGCATTCTGATTTATGAGTTCATGAGTAACGGAAGTTTAGAAAACCTTCTACATGGTGAAGAGAAGGTTTTAAGCTGGGATGAAAGGCTGCAAATTTCTCTTGATATTTCTCACGGAATTGAATACCTTCATGAAGGAGCAGTCCCACCCGTCATCCACCGTGATTTGAAATCTGCCAATATATTGTTAGATCACTCAATGCGAGCTGAGGTTGCTGACTTTGGGCTGTCAAAGGAGGAGATCTTTGATGGGCGAAATTCTGGCCTAAAAGGTACATATGGCTACATGGACCCATCCTACATTTCCACTAACAAGTTTACAATGAAGAGTGACATCTACAGCTTCGGTATCATCATTTTTGAGCTCATCACTGCCATCCACCCACGTCAAAATTTGATGGAATATATTAACCTTGCAGCAATGGATTATGATGGTGTAGATGGGATACTTGACAAGAAACTAGTAGGAAAATGCAGCCTCGAAGAAGTGAGGCAGCTTGCTAAAATTGCACACAAATGCTTGCATAAATCACCCAGGAAACGCCCCTCTATAGGTGAGGTTTCACAGGGTATATCGAGCATTAAGCAACGGCGTCGTCTTGCAAAAGAACATACCATGTCATTGTCATTTGCAGGCTCTAGCTTTTCCAGAGCTGTGAGTCGAATTGAGGATCAACAGGTTGAGTTAAGTAGGATGAGCACTATCGATCACAGGGAAACTGGATGA 1401 0.4126 MESQPKEQINSKNRKGAILPDKGPLELFACKICLNVKRDQIMVHQADLVIIGVTVGLAFGILIASLIFFIIRWYKRRAHLRRCANERSLTTLPIRTNGLGTSTDFSASLTSSITASGLENLQKNSHFSWWNRKKKDQFASPSSIFRYSYKEIQKATQNFTAVLGQGSFGTVYKATMPTGEVVAVKVLGSNSKQGEREFQTEVLLLGRLHHRNLVNLLGYCVDKGQRILIYEFMSNGSLENLLHGEEKVLSWDERLQISLDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAEVADFGLSKEEIFDGRNSGLKGTYGYMDPSYISTNKFTMKSDIYSFGIIIFELITAIHPRQNLMEYINLAAMDYDGVDGILDKKLVGKCSLEEVRQLAKIAHKCLHKSPRKRPSIGEVSQGISSIKQRRRLAKEHTMSLSFAGSSFSRAVSRIEDQQVELSRMSTIDHRETG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3123 466 SUPERFAMILY Protein kinase-like (PK-like) 137 413 IPR011009 -
Bisa03g3123 466 Pfam Protein tyrosine and serine/threonine kinase 159 413 IPR001245 GO:0004672|GO:0006468
Bisa03g3123 466 SMART serkin_6 157 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3123 466 Gene3D Transferase(Phosphotransferase) domain 1 233 438 - -
Bisa03g3123 466 ProSitePatterns Protein kinases ATP-binding region signature. 163 185 IPR017441 GO:0005524
Bisa03g3123 466 Gene3D Phosphorylase Kinase; domain 1 121 232 - -
Bisa03g3123 466 FunFam serine/threonine-protein kinase PBS1-like 128 232 - -
Bisa03g3123 466 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 233 443 - -
Bisa03g3123 466 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 434 - -
Bisa03g3123 466 ProSiteProfiles Protein kinase domain profile. 157 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3123 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Bisa03g3123 466 CDD STKc_IRAK 163 414 - -
Bisa03g3123 466 PIRSF TyrPK_CSF1-R 147 251 - -
Bisa03g3123 466 PIRSF TyrPK_CSF1-R 37 77 - -
Bisa03g3123 466 PIRSF TyrPK_CSF1-R 243 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3123 Bisa-ChrBisa03 53779498 53788958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3123 146 412 Receptor kinase-like Gene Family AT3G19300 42.754 1.98e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Bisa03g3123 PK_Tyr_Ser-Thr 1.7e-49 CL0016