Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3111 ATGGCTTCTCCAAGTTCTTCCCCTGTTGCGGTCTCACCTTCTTCTGTTGATATTTCTCCACCACCACCACTACCTCCTTCAGATTCCCCTACAAATTCTTCCATCACATCCCCAGCTCCCACTTCATCTCAGACCAGCCAAACCTCTAATCCACCTGTTCCTTCATCTCCTTCTGAACCTGTCTCCCCACCTCCTTCTTCCCCGCAGGAAGTATCCAAAACTCCTCCTCCTTCACCTCCGCAGGCAATATCTAAAACCCCACCTCCTTCACCTCCGCAGCCAATATCTAAAACCCCACCTCCTTCTCCGTCTGTTTCTCCTCCACCGCCACCGTCTACACCACCACCAACTTCACCTCCACCTTCCTCACCAGCTTCTCCACCACCAACACCTCCGGTATTGGCACCACCAACACCTCCGGCATTGCCACCACCGTCGCCTCCGGCATTGCCACCACCTTCGCCTAAGGTCACATCACCCCCACCAGCAGCTGCCACTGCCCCTCCTCCAACTAAGACTTCACCTTCCCCTCCAATTTTATCCCCACCACCTCCAGTAGCAGGTTCTCCCCCTCCCCAAGCCTCAGGGGCATCTCCTGCGGCAAATCCACCTCCTGCCCTGCAAATTTCGCCTTCTCCCCCTCCTCCTGCTAATGTCCGAAGAACACCATCCTCAGGTTCTCCACCTTCTCCGCAGGGAAAGCCGCCCGAAAGTACTTCTCTTACACCCCCTCCATCTGTTTCTAAATCTCCTTCTCCTCCTTCTACTAGTATTCCCCCTCAATCCACAATGCCATCACCTCCCCCTTCAGTCCCATCTGCCTCGTCACCTCCTCCAGTTTTTTCGCCTGCTGCTCCAACTAATTCATCAGAAGCTGGGAGCCCAACTGAGTCTTTACCCTCTATTCCAACAGAGAAACCAACTGCAAAATCAACTGATGGTACTGATATAACCACAAATGGCCCACCTACACATACAGGAGGGTTAAATAGAGGAGGAGGTGTGGCTATTGGCATTGTAGTTGGTTTTGTTGTCCTCAGCCTTCTTGTTATGGCCGTGTGGTTTGTACAGAAACGAAAGAGGAAGGAAAAAGGATCAAAAGCTGGTTATGCTATGCCTTCTCCATTTGCTTCATCTCAGAATTCAGGTACCTTATTCTTGAAGACACAGTCCCCGGCTCCCTTGTTTGGTAGTAACTCTGGTAGTGATTTCATGTATTCTCCATCAGAGCCGGTAAGTAACTCAAGATCATCATTCACATATGAAGAACTTGTCCAAGCAACAAATGGTTTTTCAGCACAAAACCTTTTGGGCGAAGGTGGATTTGGTTGTGTCTTCAAAGGTTTTCTCATAGATGGAAGAGAAGTAGCTGTGAAACAGCTCAAAGTTGGTAGTGGGCAAGGGGAGCGTGAGTTCCAAGCAGAAGTTGAAATTATTAGTAGAGTACATCATCGCCATCTGGTTTCCTTGGTGGGTTACTGTATACAAGAGCATCAAAGATTGCTTGTCTATGATTATGTGCCCAACGATACCCTTCATTACCATCTTCATGGTGAAGACAGACCAGTTTTGGACTGGGCTACCAGAGTCAAGGTTGCTGCTGGTTCAGCTAAAGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCACCGAGACATTAAGTCATCAAACATCCTTCTTGACAACAACTTTGAAGCTCGAGTTTCAGACTTTGGGCTTGCAAAATTAGCCTTGGATTCAAACACTCATGTAACGACACGTGTGATGGGAACCTTTGGGTACATGGCACCAGAATATGCAACAAGTGGGAAATTGACTGAAAAGTCAGATGTTTATTCCTTTGGGGTTGTGCTTTTGGAGCTAATAACAGGTCGGAAGCCTGTGGATACCTCTCAACCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGACCTTTGCTGACTCAAGTACTTGATAATGAAAACTTCGAAATATTGGTGGATCCAAGGCTAGAGAATAGCTATAACAGAGCAGAAATGTTCCGGATGATCGAGGCTGCTGCAGCCTGTGTGCGTCACTCTGGAGCAAAGAGGCCTCGGATGAGTCAGGTTGTGAGAGCTCTAGATTCCTTAGATGAATTAGCTGATCTCAATAATGGAATGAAACCTGGGCAGAGTTCAGTCTTTAATTCTGCAGAGCATAGTGAACAAATCAGAATGTTCAGGAGGATGGCTTTTGGCAGCCAGGATTACAGTACAAGTTATTTTAATGAGTCTCAGAGTAGCTGGAGGAGTAGAGATCAGGAGCATCAAAGCACTTCTTCGTTCTCCCAAAATAAATCTGGACCGTGGAATTGTGTTGCGCTTCATGTTCGTGTCAGTATTGGTGCTCCATGGGATACAGGATTATGCGTTACCATGCCCAAGTTCAGTTGGAAAGCTTTTGATGCACACAGGATAGATGATATCTGCTTAAACTTTGCCAGAGAAGCTGAAGCATCTCGATTCAGATAA 2502 0.4756 MASPSSSPVAVSPSSVDISPPPPLPPSDSPTNSSITSPAPTSSQTSQTSNPPVPSSPSEPVSPPPSSPQEVSKTPPPSPPQAISKTPPPSPPQPISKTPPPSPSVSPPPPPSTPPPTSPPPSSPASPPPTPPVLAPPTPPALPPPSPPALPPPSPKVTSPPPAAATAPPPTKTSPSPPILSPPPPVAGSPPPQASGASPAANPPPALQISPSPPPPANVRRTPSSGSPPSPQGKPPESTSLTPPPSVSKSPSPPSTSIPPQSTMPSPPPSVPSASSPPPVFSPAAPTNSSEAGSPTESLPSIPTEKPTAKSTDGTDITTNGPPTHTGGLNRGGGVAIGIVVGFVVLSLLVMAVWFVQKRKRKEKGSKAGYAMPSPFASSQNSGTLFLKTQSPAPLFGSNSGSDFMYSPSEPVSNSRSSFTYEELVQATNGFSAQNLLGEGGFGCVFKGFLIDGREVAVKQLKVGSGQGEREFQAEVEIISRVHHRHLVSLVGYCIQEHQRLLVYDYVPNDTLHYHLHGEDRPVLDWATRVKVAAGSAKGIAYLHEDCHPRIIHRDIKSSNILLDNNFEARVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDTSQPIGDESLVEWARPLLTQVLDNENFEILVDPRLENSYNRAEMFRMIEAAAACVRHSGAKRPRMSQVVRALDSLDELADLNNGMKPGQSSVFNSAEHSEQIRMFRRMAFGSQDYSTSYFNESQSSWRSRDQEHQSTSSFSQNKSGPWNCVALHVRVSIGAPWDTGLCVTMPKFSWKAFDAHRIDDICLNFAREAEASRFR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3111 833 FunFam Proline-rich receptor-like protein kinase PERK8 404 506 - -
Bisa03g3111 833 SMART serkin_6 431 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3111 833 MobiDBLite consensus disorder prediction 30 52 - -
Bisa03g3111 833 Pfam Protein tyrosine and serine/threonine kinase 434 704 IPR001245 GO:0004672|GO:0006468
Bisa03g3111 833 MobiDBLite consensus disorder prediction 15 29 - -
Bisa03g3111 833 SUPERFAMILY Protein kinase-like (PK-like) 410 704 IPR011009 -
Bisa03g3111 833 Gene3D Transferase(Phosphotransferase) domain 1 507 723 - -
Bisa03g3111 833 MobiDBLite consensus disorder prediction 1 330 - -
Bisa03g3111 833 CDD STKc_IRAK 437 707 - -
Bisa03g3111 833 MobiDBLite consensus disorder prediction 285 326 - -
Bisa03g3111 833 ProSiteProfiles Protein kinase domain profile. 431 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3111 833 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 343 756 IPR047117 -
Bisa03g3111 833 MobiDBLite consensus disorder prediction 53 284 - -
Bisa03g3111 833 Gene3D Phosphorylase Kinase; domain 1 402 506 - -
Bisa03g3111 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672|GO:0006468
Bisa03g3111 833 ProSitePatterns Protein kinases ATP-binding region signature. 437 459 IPR017441 GO:0005524
Bisa03g3111 833 FunFam proline-rich receptor-like protein kinase PERK8 507 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3111 Bisa-ChrBisa03 53463745 53470372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3111 324 700 Trihelix Transcription Factor Family AT1G68690 64.987 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa03g3111 PK_Tyr_Ser-Thr 3.9e-47 CL0016