Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3106 ATGGACGGAGAAAATCAGCTTCAGAACCAATCTCATGGTGGCTCTCTGTCCTTTCACTCTCTGTCTCAGTCCACGCGTGTCTAATCCATAGCTTTCCCAATTCAAGGCATGGAGTCTGTGGTGGCTACAGTGAGTGGTTACCATGGCTCAGACCGATTCAACCTCATCAAGTTAATTTCACATGCTGGTGCAAATTATGTGGGCGCAATGTCAAAATCAATCACGCACTTGATTTGTTGGAAATTTGAAGGAAAAAAATATAATCTTGCCCAGAAGTTCAAAACTGTTATAGTAAACCACAAATGGGTTGAAGACTGCATAAAGCAAGGAAGGCGTGTTCCAGAGGAATCTTATATGTTGAAAAGTGGACAAGAAGTAAGGCCAATATTGCTGCAAGTTCCACTCCTTGTCCAATTGAGTAGCTTGACTAAGAGTAAAGTACGTGGTCACAGATCAGATGACATTGGCCCCAAAAAGCAAACAAATCAGTTCAGTTCTGGAGATTCTGGAAATTCTGTTCAGGAAGATTGTAGTTTAATGAACAAGTCCAGAAAAGCAAAAAGAAAGATCTCCAATAGTAATGGAGAGGCTACTTCAGCTGGTCCTTCTGGTCAAAGAAGAAGGCTTGTGAAAAACAATATTCATGAAGTGGTGTTGGATCCTACACTTGATTTAAACCCTGAGAACCACCTTAGTCGAATGCAAAGATTACGTACTGATACTGCAGCTTCCTCCAGCGTCCTTGGTGGTGTCTCTACTGATAATATTTTAGAAACTAGAGAAGGCTCAGATGTTGGGTCATATAATCAAAATGGAAACATCCTTGGAGCTTCAAATGCTGTTGAACAGATCAATGATTCAAATAATTTATCCAATCCAAGAGTTTCAACTTTATACATAGAAGATGCCTCACCTACTATGGATCAAACATCAGTAGATGAAGCCACTCATGTTGCTGACTTACCTACTTCAATAGAGTTGTCATGTGTCATATGTTTGACGGAGTTCAGCTCAACAAGGGGGGTTTTGCCATGTGGACATCGGTTTTGTTATTCATGCATCCAGAGTTGGGTTGACCATAGGACTACAATGAGAAAAAATTCAACATGCCCCTTGTGCAAGTCGACTTTTGACAGCATAATTAAATATGAGGATGCAGCCGCTGATCAAAAAGTATACTCCCAAACAATTCCATGTGGCATTCCAATCTCAGATGATTTTATCCTTATGGATCGAGAGCAACCAAATTATGTTTCTGAGATGCAATCCTCACAGGCAGATGCTTGTGTTGTTTGCCGTGGGCGGGAACCCGAGGATCTGCTCATGAGTTGCCATCTTTGCCATATTCGACAAATCCATTCCTATTGCCTGGACCCTCCTTTGTTGCCATGGACATGCAGTCACTGTAAGGATCTTCAGATGCTTTATCATAACCGTTCACGTTAG 1446 0.4149 MDGENQLQNQSHGGSLSFHSLSQSTRVXSIAFPIQGMESVVATVSGYHGSDRFNLIKLISHAGANYVGAMSKSITHLICWKFEGKKYNLAQKFKTVIVNHKWVEDCIKQGRRVPEESYMLKSGQEVRPILLQVPLLVQLSSLTKSKVRGHRSDDIGPKKQTNQFSSGDSGNSVQEDCSLMNKSRKAKRKISNSNGEATSAGPSGQRRRLVKNNIHEVVLDPTLDLNPENHLSRMQRLRTDTAASSSVLGGVSTDNILETREGSDVGSYNQNGNILGASNAVEQINDSNNLSNPRVSTLYIEDASPTMDQTSVDEATHVADLPTSIELSCVICLTEFSSTRGVLPCGHRFCYSCIQSWVDHRTTMRKNSTCPLCKSTFDSIIKYEDAAADQKVYSQTIPCGIPISDDFILMDREQPNYVSEMQSSQADACVVCRGREPEDLLMSCHLCHIRQIHSYCLDPPLLPWTCSHCKDLQMLYHNRSR 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3106 481 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 324 393 IPR013083 -
Bisa03g3106 481 ProSiteProfiles BRCT domain profile. 29 120 IPR001357 -
Bisa03g3106 481 MobiDBLite consensus disorder prediction 158 179 - -
Bisa03g3106 481 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 414 480 IPR013083 -
Bisa03g3106 481 ProSitePatterns Zinc finger RING-type signature. 345 354 IPR017907 -
Bisa03g3106 481 PANTHER F5A8.9 PROTEIN 160 480 - -
Bisa03g3106 481 Gene3D BRCT domain 34 125 IPR036420 -
Bisa03g3106 481 ProSiteProfiles Zinc finger RING-type profile. 329 374 IPR001841 -
Bisa03g3106 481 Pfam twin BRCT domain 40 102 IPR001357 -
Bisa03g3106 481 SUPERFAMILY RING/U-box 328 381 - -
Bisa03g3106 481 SUPERFAMILY BRCT domain 33 121 IPR036420 -
Bisa03g3106 481 SMART ring_2 329 373 IPR001841 -
Bisa03g3106 481 MobiDBLite consensus disorder prediction 148 211 - -
Bisa03g3106 481 SMART BRCT_7 34 110 IPR001357 -
Bisa03g3106 481 Pfam Ring finger domain 328 374 IPR001841 -
Bisa03g3106 481 SUPERFAMILY FYVE/PHD zinc finger 419 471 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3106 Bisa-ChrBisa03 53388853 53396382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3106 74 126 Core DNA Replication Machinery Family AT4G02110 51.852 4.67e-12 66.6