Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3085 ATGGCCACCCCATTAACACCCCTCTGCCTTCTTCTCTGCTTCCCACTCTCACTCCTCCTCTGCCTCTCCATTTCTCCCTCCTCTGCTCTCCTCTCTCCCAAAGGTGTCAACTTTGAAGTTCAAGCTTTGATGGCTATCAAAGATTCTCTGGTTGATCCTCATGGCGTTTTAGATAATTGGGATGCCGATGCCGTTGATCCTTGTAGCTGGACTATGGTCACTTGCTCTTCAGACAACCTCGTCGTTGGCCTGGGCACTCCCAGTCAAGATTTATCTGGAACTTTATCTCCCTCCATAGGAAACCTCACGAACCTTCAGATTGCGTTGTTACAGAATAATAACATAACAGGTCCAATTCCTTCAGAGCTGGGAAGGCTTTCCAAGCTTCAAACCCTTGATCTCTCTAATAACCTCTTCACTGGGGAAATCCCTTCATCTCTGGGACGCATCAGAAGGCTCCGCTACTTGAGGCTCAATAATAATAGTCTTTCTGGAGTGTGTCCAGAGGCACTGGCGAACATGACACAGCTTGCTTTTCTTGACATGTCCTTCAACAATCTGAGTGGCCCCTTACCCAGAATTTTAGCCAAATCATTCAACATTGTGGGAAACCCCATCATCTGCAACACAGGAAAAGAAAACAACTGCCATGGGATGACACTGATGCCTATGTCCATGAACTTAAACAGTACAGATGATGGAAGGCCTTCTGGAAGACGAAGAACACAGCAAGTGGCAATTGCCTTTGGGTTGAGCCTAGGATGCCTCTGCCTCATCGTTGTTGGTTTCGGAGTATTTCTGGTTTGGAGGCACAAGCACAATCAACACCCTTTCTTCGATGTCAAAGAGCGTGATGAGGAAGAAGTGTACCTGGGAAACCTGAGGAGGTTCCTATTCAGAGAGCTGCAGAATGCAACCAACAACTTCAGCAGCAAGAACATTCTGGGGAAGGGAGGGTTCGGCCATGTGTACAAGGGACTCCTCTCCGACGGCACCCTCGTGGCCGTGAAGAGGCTCAGAGATGGCAACGCCATCGGAGGAGAGGTCCAGTTTCAGACTGAGCTCGAAATGATCAGCCTGGCTGTCCACAGAAACCTCCTCAGACTCTATGGCTTCTGCATCACCCCCTCTGAGAGGCTCCTCGTTTACCCCTTCATGTCCAATGGCAGCGTTGCTTCCCGTCTCAAAGCAAAACCAGTGCTGGAGTGGGGAAGAAGGAAGCAGATAGCGATCGGAGCAGGAAGGGGACTGGTTTACCTGCACGAGCAGTGCGACCCTAAGATCATCCACCGCGACGTCAAGGCTGCCAACATCCTCCTCGACCACCTCTGCGAGGCCGTCGTCGGCGACTTCGGACTCGCCAAGCTCCTCGACCACCGCGACTCCCACGTCACCACCGCCGTCCGGGGCACCGCCGGCCACATCGCCCCCGAGTACCTCTCCACCGGCCAGTCCTCCGACAAGACCGACGTCTTCGGCTTCGGCATCCTCCTCCTTGAGCTTCTCACCGGCCAGAGGGCCATCGAGTTTGGCAAGGCGGCTTCCCAGAGAGGAGCCATGCTTGACTGGGTAAAGAAACTTCATGAGGAGAAGAAACTCGAATTGCTTGTAGACAAGGATCTGAAGAACAACTATGACAGAATCGAGCTTGAAGAAATGGTGCAAGTGGCTCTTCTGTGCACTCAGTACCTTCCCGGACACAGACCTAAGATGTCTGAAGTAGTGAGAATGCTTGAAGGTGACGGACTTGCAGAGAGATGGGAAGCTTCTCAGAGAGTTAATAATGACGCAACACCAAAATGCGTGAAACCCCATGAATTCTCCTCTTCAGATCGCTATTCTGATCTCACCGATGATTCTTCTTTGCTTGTCCAAGACATGGAGCTTTCTGGCCCAAGGTGA 1902 0.5147 MATPLTPLCLLLCFPLSLLLCLSISPSSALLSPKGVNFEVQALMAIKDSLVDPHGVLDNWDADAVDPCSWTMVTCSSDNLVVGLGTPSQDLSGTLSPSIGNLTNLQIALLQNNNITGPIPSELGRLSKLQTLDLSNNLFTGEIPSSLGRIRRLRYLRLNNNSLSGVCPEALANMTQLAFLDMSFNNLSGPLPRILAKSFNIVGNPIICNTGKENNCHGMTLMPMSMNLNSTDDGRPSGRRRTQQVAIAFGLSLGCLCLIVVGFGVFLVWRHKHNQHPFFDVKERDEEEVYLGNLRRFLFRELQNATNNFSSKNILGKGGFGHVYKGLLSDGTLVAVKRLRDGNAIGGEVQFQTELEMISLAVHRNLLRLYGFCITPSERLLVYPFMSNGSVASRLKAKPVLEWGRRKQIAIGAGRGLVYLHEQCDPKIIHRDVKAANILLDHLCEAVVGDFGLAKLLDHRDSHVTTAVRGTAGHIAPEYLSTGQSSDKTDVFGFGILLLELLTGQRAIEFGKAASQRGAMLDWVKKLHEEKKLELLVDKDLKNNYDRIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEASQRVNNDATPKCVKPHEFSSSDRYSDLTDDSSLLVQDMELSGPR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3085 633 FunFam Putative LRR receptor-like serine/threonine-protein kinase 36 218 - -
Bisa03g3085 633 MobiDBLite consensus disorder prediction 595 633 - -
Bisa03g3085 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Bisa03g3085 633 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Bisa03g3085 633 SMART serkin_6 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3085 633 FunFam Somatic embryogenesis receptor-like kinase 1 386 598 - -
Bisa03g3085 633 SUPERFAMILY L domain-like 39 201 - -
Bisa03g3085 633 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Bisa03g3085 633 Gene3D Transferase(Phosphotransferase) domain 1 386 597 - -
Bisa03g3085 633 ProSiteProfiles Protein kinase domain profile. 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3085 633 Pfam Protein kinase domain 310 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3085 633 Gene3D Ribonuclease Inhibitor 36 218 IPR032675 -
Bisa03g3085 633 Gene3D Phosphorylase Kinase; domain 1 278 385 - -
Bisa03g3085 633 Pfam Leucine rich repeat N-terminal domain 39 76 IPR013210 -
Bisa03g3085 633 SUPERFAMILY Protein kinase-like (PK-like) 293 581 IPR011009 -
Bisa03g3085 633 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 589 - -
Bisa03g3085 633 FunFam Somatic embryogenesis receptor kinase 1 278 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3085 Bisa-ChrBisa03 52838540 52843651 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3085 19 633 Receptor kinase-like Gene Family AT5G16000 76.129 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bisa03g3085 Pkinase 1e-41 CL0016