Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3079 ATGGCCTCTAAAATGGAAACCGGGAATTCTACGGATGCTGCTCCATCATCGCCAAAGAATATATACAAAGATCCAGATGACGGCCGGCAGCGATTTTTGCTTGAACTGGAATTTGTTCAATGCCTTGCTAATCCAACCTACATACACTATTTGGCTCAGAATCGATATTTTGAGGATGAAGCATTTATTGGATACCTGAAGTACCTTCAATATTGGCAACGACCTGAATACGTTAAATTTATTATGTATCCTCATTGCCTCTTCTTTCTTGAACTCCTTCAGAATGCTAATTTTCGCAATGCAATGGCACATCCTGGTAATAAGGAACTTGCACATAGACAACAATTCTACTTCTGGAAGAACTATAGGAACAATCGGTTAAAACACATTTTACCAAGGTCACTCCCTGACTCTAGTGCCACACCTGCACCTCCTGCAGCTGCCTCAACTCCATCTCAGCTGCCCGTGCCTGCTCTGCCACCAGTACCACCTACAAATGTTCCGGTGACTGCATCATCTGCTCAAGCTCCTTCTCCAATGCCATATGGCATGCCCCCTGGATCTGCTCTTGCAAAAAATGATATGAGGAATCCTGCAGTTGATAGGAGGAAGAGAAAATAA 621 0.4364 MASKMETGNSTDAAPSSPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYVKFIMYPHCLFFLELLQNANFRNAMAHPGNKELAHRQQFYFWKNYRNNRLKHILPRSLPDSSATPAPPAAASTPSQLPVPALPPVPPTNVPVTASSAQAPSPMPYGMPPGSALAKNDMRNPAVDRRKRK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3079 206 MobiDBLite consensus disorder prediction 148 167 - -
Bisa03g3079 206 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
Bisa03g3079 206 MobiDBLite consensus disorder prediction 1 17 - -
Bisa03g3079 206 MobiDBLite consensus disorder prediction 1 22 - -
Bisa03g3079 206 FunFam Mediator of RNA polymerase II transcription subunit 31 18 119 - -
Bisa03g3079 206 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Bisa03g3079 206 MobiDBLite consensus disorder prediction 133 206 - -
Bisa03g3079 206 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 1 206 IPR008831 GO:0003712|GO:0006355|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Bisa03g3079 Med31 2e-35 No_clan