Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3068 ATGGAGGAGCCTGGCGATCTACCACGCGCCACGGAAGCCGAGTTGCCGACCCCTGAGATCCGAGAAGACGTGTGGGAGGAAGCCACCATTGACAACGGCGATACGACGGTGCACCACGCACTTGAAATTACCGTTGCCAGTAATGAGCCTCGCTCACTGTCTTTCCTGCTCTCGTTCAGCAATCTCACATACAGCGTGAAGGTTCGCCGGAAAGTGAAATCCTCAACGCTGTTCTCGCGGCGGTCGGGGAATGGCCGTCGCGGAGCGCCAGAAACCAAGAATCTGCTGAATGATATCTCCGGAGAGGCTCGCGACGGCGAGGTCCTCGCCGTTATGGGAGCCAGTGGATCAGGGAAATCCACTTTAATCGATGCGCTGGCCAACCGAATAGCCAAGGAAAACCTGAAAGGTCACGTGACATTGAACGGCGAGGCGTTCGAATCGCGGCTTCTGAGAGCGATTTCAGCCTATGTGATGCAAGACGACCTTCTCTATCCAATGCTCACAGTGGAAGAGACGCTGATGTTCGCAGCCGAATTCCGATTGCCTCACACGCTCTCCAGATCCAAGAAGAAGATTCGCGTACAAGCTCTGATCGATCAACTCGACCTCAAGAATGCAGCCAACACCGTTATCGGCGACGAAGGCCACCGCGGGGTGTCCGGCGGCGAACGGCGCCGTGTCTCAATCGGAATTGACATAATACACGACCCTATCGTCTTGTTCCTCGATGAACCTACATCGGGACTGGACTCCACGAGCGCGTTCGTGGTGGTGAAGGTCTTGCAGAGAATCGCTCACACCGGAAGCATCGTGTTCATGTCCATACACCAACCGAGTTCTCGAATACTTGGTCTTATCGACAGAGTGATCATCTTGTCACGCGGAGAAACGGCGTTCAGTGGTTCTCCCTCGCAGCTTCCTCTCTTCTTCGCTGAATTTGGACGACCCATGCCGGAGAATGAGAACCAAACGGAGTTTGCATTGGACGTGATTCGTGAACTAGAAGAATGCTCATCCAGCGGAACCAACTGTTTGGTGGAGTTCAACAAGACGTGGCAGAGTAATAAGACTGAGGTTGATGATCACCATGAATTATCTTTGAAAGAAGCAATCGCTGCAAGCATCTCGAGGGGTAAACTAGTTTCAGGCGCCACAAACACCAGCACCACTTCAATCTCATCATTCGCGAACCCCTTCTGGATCGAAATCGCAAAGCTCTCCAACCGCTCCTTCACCAACTCCCGCAGACTGCCGGAGCTAATTGCTATCCGATTCGCAGCCGTCCTAGTAACCGGATTCATCCTCGCCACCATCTTCTGGCACCTCGACGACTCCCCCAAAGGCGTCCAAGAACGCCTCAGCTTCTTCGCCTTCGCCATGTCCACCACCTTCTACACAACCGCCGACGCCCTCCCCGTCTTCCTCCAAGACCGCCACATCTTCATCAGAGAAACCGCCCACAACACCTATCGCCGGTCCTCCTATCTTATCTCTCACGCTCTCGTATCACTCCCTTTGTTGCTCGTTCTCTCCTTCGCTTTCGCAACGACGACGTTTTGGGCCGTGGGCCTCGACGGAGGAATCACCGGGTTCACGTTTTATTTCCTCTTCATATTCGCTTCCTTCTGGGCGGGAAACTCCTACGTGACCTTCCTCTCTGGCGTGCTGCCTCACGTGATGCTAGGATACACAATCGTCGTGAAAACTCTAGCCTACTTTCTTCTCTTCAGTGGGTTCTTCATTAACAGAAACAGAATCCCGAGGTATTGGATCTGGTTCCACTATTTGTCTTTAGTGAAGTACCCATACGAAGCCGTTATGCGAAACGAATTCGATGATCCGTTGAAGTGCTTGGCGAGAGGGGTGCAGGTTTTCGATGGCACACAGATCGCGGCGGCGCCGGAGACGGAGAAGTTGAAGCTACTGCAAGAGTTGAGTGAGGAGTTGAGGAGGAATATCACAAGCACAACGTGCTTTGTGACAGGTGCGAATGTGTTGCAACAGAATGGGGTGACGCAGTTGAGCAAGTGGAACTGTCTGGTGGTAACGGTGGGGTGGGGTTTCTTGTTTAGGACCCTGTTTTACTTCACGTTGTTGCTGGGCAGCAAAAATAAGAGGAGGTAA 2127 0.5308 MEEPGDLPRATEAELPTPEIREDVWEEATIDNGDTTVHHALEITVASNEPRSLSFLLSFSNLTYSVKVRRKVKSSTLFSRRSGNGRRGAPETKNLLNDISGEARDGEVLAVMGASGSGKSTLIDALANRIAKENLKGHVTLNGEAFESRLLRAISAYVMQDDLLYPMLTVEETLMFAAEFRLPHTLSRSKKKIRVQALIDQLDLKNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFVVVKVLQRIAHTGSIVFMSIHQPSSRILGLIDRVIILSRGETAFSGSPSQLPLFFAEFGRPMPENENQTEFALDVIRELEECSSSGTNCLVEFNKTWQSNKTEVDDHHELSLKEAIAASISRGKLVSGATNTSTTSISSFANPFWIEIAKLSNRSFTNSRRLPELIAIRFAAVLVTGFILATIFWHLDDSPKGVQERLSFFAFAMSTTFYTTADALPVFLQDRHIFIRETAHNTYRRSSYLISHALVSLPLLLVLSFAFATTTFWAVGLDGGITGFTFYFLFIFASFWAGNSYVTFLSGVLPHVMLGYTIVVKTLAYFLLFSGFFINRNRIPRYWIWFHYLSLVKYPYEAVMRNEFDDPLKCLARGVQVFDGTQIAAAPETEKLKLLQELSEELRRNITSTTCFVTGANVLQQNGVTQLSKWNCLVVTVGWGFLFRTLFYFTLLLGSKNKRR 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3068 708 SMART AAA_5 105 297 IPR003593 GO:0016887
Bisa03g3068 708 CDD ABCG_EPDR 57 302 - -
Bisa03g3068 708 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 45 695 - -
Bisa03g3068 708 FunFam ABC transporter G family member 6 86 311 - -
Bisa03g3068 708 Pfam ABC-2 type transporter 407 612 IPR013525 GO:0016020|GO:0140359
Bisa03g3068 708 Pfam ABC-2 type transporter 277 406 IPR043926 GO:0140359
Bisa03g3068 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 307 IPR027417 -
Bisa03g3068 708 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524|GO:0016887
Bisa03g3068 708 Gene3D - 86 309 IPR027417 -
Bisa03g3068 708 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 72 320 IPR003439 GO:0005524
Bisa03g3068 708 Pfam ABC transporter 96 248 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3068 Bisa-ChrBisa03 52427114 52430038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3068 90 307 Calmodulin-binding Proteins AT2G36910 27.602 7.05e-13 70.5