Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3020 ATGCCTCTCTCGACTTCCCTAGTGCCTTGGGCACTAGATGTGGCTAAATGTTATCGGTTTTGGGCTATTGCGACTTTATCTGTGACAACGACCACACTCAATCTCTTGCTTCGTTTTGAGGATCAGAGTCGGACGAAGGAAGAGGTTTCAGCTTTCTTCTCTGCTAGAAATTCCAATTCCCATTTCTCCAAGTCACTTTCTTTCCGTTCCTTGTATTTAGATTCTTCCTTTCTGGGGTTTCATTCTTCCTTCTGGGATTTCCGAGTCCGAGTTCGAATTTTGATCTTTGCTAGTACCTTGATTTGGGGTCTTTGGACATTACTAGAGCTACTCATCAAATCTCCTCTCAAAGCCATTGTTGTGAATGGAAGTGGCTTGCTGCAAGCAATACCCTTATCAAGCAATTATTTGAGTTTTTTGCATGAAATGGACAAGGAAAATACTTCATATTCCACTAGATTGGCACAGTGTCGAATATGTCATGATGAGGATGAAGACTCAAACATGGAGACACCCTGTTCTTGTTGTGGCAGTTTGAAGTATGCACATCGAAAATGTGTTCAAAGATGGTGCAATGAGAAAGGCGATACTATCTGTGAGATTTGCCAACAGCCATTCAAGCCTGGTTATACAGCACCACCTCCACTATTCCATTATGGTGGTTCCCCGTTGAATTTTAGAGGCAATTGGGAGATTTCCAGAAGGGATCTGCATAATCATCCATTCATAACAATGGTTAATACTGACCATGAATTCTCAGACACTGACTTTGAATATTCAGCTCCCTCTATGACGAGTCTGATCTGCTGCCGCATCATTGCAATCATTTTTATAGTTCTTCTTTTATTACGCCATACCCTTTCAGTTATACTCAGTGAAGCCGAGGAATATTCATTTGCACTTTATGCGTTACTATTCTTGAGAACCATTGCAATACTTCTACCTGTATGTATAATGGTTAAGGCATTCACTGTAATCCAACGGCGAAGATTCCAGGATTATCTCTCCTCTGTAGCTCCCGATGAAGAGAATGACTTGGGACAACCTCAGTCTCGTATGATTCATATTCTGTGA 1074 0.4143 MPLSTSLVPWALDVAKCYRFWAIATLSVTTTTLNLLLRFEDQSRTKEEVSAFFSARNSNSHFSKSLSFRSLYLDSSFLGFHSSFWDFRVRVRILIFASTLIWGLWTLLELLIKSPLKAIVVNGSGLLQAIPLSSNYLSFLHEMDKENTSYSTRLAQCRICHDEDEDSNMETPCSCCGSLKYAHRKCVQRWCNEKGDTICEICQQPFKPGYTAPPPLFHYGGSPLNFRGNWEISRRDLHNHPFITMVNTDHEFSDTDFEYSAPSMTSLICCRIIAIIFIVLLLLRHTLSVILSEAEEYSFALYALLFLRTIAILLPVCIMVKAFTVIQRRRFQDYLSSVAPDEENDLGQPQSRMIHIL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3020 357 CDD RING_CH-C4HC3_MARCH 157 203 - -
Bisa03g3020 357 Pfam RING-variant domain 157 202 IPR011016 GO:0008270
Bisa03g3020 357 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 148 331 IPR033275 -
Bisa03g3020 357 SMART ringv_2 156 203 IPR011016 GO:0008270
Bisa03g3020 357 SUPERFAMILY RING/U-box 154 207 - -
Bisa03g3020 357 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 211 IPR013083 -
Bisa03g3020 357 FunFam Zinc finger family protein 145 212 - -
Bisa03g3020 357 Pfam Protein of unknown function (DUF3675) 208 322 IPR022143 -
Bisa03g3020 357 ProSiteProfiles Zinc finger RING-CH-type profile. 149 209 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3020 Bisa-ChrBisa03 50760961 50769900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3020 157 203 C3H Transcription Factor Family AT2G37950 50.000 2.41e-07 48.9