Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3019 ATGGCTTTACAAAACATTGGTGCTGGAAACAGTGATGATGCCTTCTACAGATATAAGATGCCAAAAATGATTACCAAAATTGAGGGTAGAGGTAATGGTATCAAAACAAACATAGTCAATATGGTTGATATTGCAAAGGCATTGGCAAGGCCAGCCTCTTACACGACAAAGTATTTTGGCTGTGAGCTTGGAGCCCAATCTAAATTTGATGAAAAAAGTGGGACTTCTCATGTTAATGGAGCACATGATACGCCAAAACTTGCTGGGCTTCTTGAAAACTTCATAAAAAAATATGTTCAATGTTATGGCTGTAGAAACCCTGAAACTGAGATCCAGATTACTAAGAATCAAATGATCCAGCTGAAATGTGCTGCTTGTGGCTTTATGTCAGATGTGGATATGAGGGATAAGCTGACTACTTTTATCATAAAAAACCCTCCTGAAGCAAAGAAAGGGTCCAAAGACAAGAAAGCCATGAGGAGAGCTGAGAAAGAGAGACTGAAGGAAGGTGAAATGGCTGACGAGGAACAGAAAAAATTGAAGAAGGAGGTTAAGAAGAAGGGTTCTTCCTCTTCCAAGGATGGAAACACAAAATCTTCAAAAAAGAAAGCCACTGGCTCTGATGAAGACCGTGCATCACCCACTCGCACTCAAAGTCATGAAGAGTCTCATGTTGAAGAAGAAGAAGAAGAAGATGATGATGATGTTCAATGGCAAACAGACACGTCGCTGGAGGCTGCTCGTCAACGTATTCAAGAACAGTTAAATGCGGTGACTGCTGATATGGTGATGCTCTCCACAAATGAGCCAGAGAAGAAGGCCAAAACGGCAAATAAGGCAAGTAATGGTTCTGAGAATGATAACTTGATGCGTTACAGGTCTCTGGTAGAGGAAGTGAAATCATATCTGAAGAAAGGTGTGGTTGCAAAGGAACTGCAAGTTAAGTTAGCAGCACTTTCTGCATCCGTTCAAGATAAGATGAGTGCTGTGTTTGAGGCCTTGTTCGATGGTGTTGAGAAAGGGTTTGCTAAAGAAGTGGTCAAGAAGAAGAACTACCTTGCCGCTGCTGTTGCTGAGGATGCGGGGTCAAAGTTGTTATTGCTTCATGCAATAGAGAATTTTTGCTGCAAGTCCACTTCCAATTCCAATGCTTTGAAGGAGGTTGCCCTAGTTCTGAAGGCACTCTATGACGCTGATGTGCTGGACGAAGAGGACATAGTGCAGTGGTATCAGAAAGGGCTAAAAGGAGATGACAGGGATTCCAAGATATGGAAGAATGTTAAACCCTTCATTGATTGGCTTCAGAGTGCAGAATCAGAATCAGAGGCAGAATAA 1335 0.421 MALQNIGAGNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKSGTSHVNGAHDTPKLAGLLENFIKKYVQCYGCRNPETEIQITKNQMIQLKCAACGFMSDVDMRDKLTTFIIKNPPEAKKGSKDKKAMRRAEKERLKEGEMADEEQKKLKKEVKKKGSSSSKDGNTKSSKKKATGSDEDRASPTRTQSHEESHVEEEEEEDDDDVQWQTDTSLEAARQRIQEQLNAVTADMVMLSTNEPEKKAKTANKASNGSENDNLMRYRSLVEEVKSYLKKGVVAKELQVKLAALSASVQDKMSAVFEALFDGVEKGFAKEVVKKKNYLAAAVAEDAGSKLLLLHAIENFCCKSTSNSNALKEVALVLKALYDADVLDEEDIVQWYQKGLKGDDRDSKIWKNVKPFIDWLQSAESESEAE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3019 444 Gene3D - 283 444 - -
Bisa03g3019 444 MobiDBLite consensus disorder prediction 145 237 - -
Bisa03g3019 444 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Bisa03g3019 444 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Bisa03g3019 444 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Bisa03g3019 444 MobiDBLite consensus disorder prediction 148 223 - -
Bisa03g3019 444 SUPERFAMILY ARM repeat 292 438 IPR016024 -
Bisa03g3019 444 SMART 542_3 350 440 IPR003307 GO:0005515
Bisa03g3019 444 Gene3D - 105 145 - -
Bisa03g3019 444 ProSiteProfiles W2 domain profile. 285 444 IPR003307 GO:0005515
Bisa03g3019 444 CDD W2_eIF5 294 442 - -
Bisa03g3019 444 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 442 IPR045196 GO:0003743|GO:0006413
Bisa03g3019 444 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Bisa03g3019 444 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Bisa03g3019 444 Pfam eIF4-gamma/eIF5/eIF2-epsilon 366 444 IPR003307 GO:0005515
Bisa03g3019 444 Gene3D - 3 104 - -
Bisa03g3019 444 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3019 Bisa-ChrBisa03 50758122 50759456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3019 1 437 Eukaryotic Initiation Factors Gene Family AT1G77840 63.901 0.0 520