Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2990 ATGAAACCCATCCAAAACAAGAAAACTCGCAAGGCAACATTCTTGAGGAGGAAGAAAGGTTTAATGAAGAAAGCTTCAGAATTATCCACACTCTGCGGAATCAATGTCTGTCTGATAATCTACCCTCCTCAATCAGAACAAGGCGAGCCAGAGATATGGCCTAAAGACCGACAAGAAGTAATTCGGAATATCAAAAAGTACAATGACAAGAAGAAATCTCAGAAGAAATCCAAGAAGTCCTATGATCTCCACGAGTTCTTTAAGGATAAAAAGACCCAGATTCAGAGTGAGACTTCCAAGGTTCAAGAACAGAGGCTGAGGATGTCGTATCCAACATGGGATGAAAGTCTCGATAACCTCGAAAAGGAAAAGCTGAGCATGCTGATCGGTTCGTTGGATTCTAAGATTAAAGAGTGTAATCAGAAGATTGAGTTTATGAAGATAGAAAAGGCAAAAGAATCAGATATTGTCCCTGTAATTCCAACGAACTCTGAGACGGGTTTGATGCCGCACATATCTCAAGGCAACCTTTTCACTCATCCTATAATGCCACTTGTCGATTTATATCCTCTTCAGTCTCATATGCTTCCCTTTGTTTATGATTATGATCCAAATTTTTCGGTGTGTTATGATAATATTGGAGGGGTTCAATCAGTGACGCAACCATTTTATGAGTTTATCTATGACCCTGCTTTGGACAGTATTGCCTTTGAGGATTTGATGTACGATGAAACAGTCTTTTCGAAAGGATTTGAGATAGAAGGGTACCTTGATTCTGTTCATGCTTCATTTTGGGAATGA 801 0.3945 MKPIQNKKTRKATFLRRKKGLMKKASELSTLCGINVCLIIYPPQSEQGEPEIWPKDRQEVIRNIKKYNDKKKSQKKSKKSYDLHEFFKDKKTQIQSETSKVQEQRLRMSYPTWDESLDNLEKEKLSMLIGSLDSKIKECNQKIEFMKIEKAKESDIVPVIPTNSETGLMPHISQGNLFTHPIMPLVDLYPLQSHMLPFVYDYDPNFSVCYDNIGGVQSVTQPFYEFIYDPALDSIAFEDLMYDETVFSKGFEIEGYLDSVHASFWE 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2990 266 CDD MADS_SRF_like 1 63 IPR033897 GO:0000981|GO:0000987|GO:0045944
Bisa03g2990 266 Gene3D - 6 105 IPR036879 GO:0003677|GO:0046983
Bisa03g2990 266 ProSiteProfiles MADS-box domain profile. 1 41 IPR002100 GO:0003677|GO:0046983
Bisa03g2990 266 Coils Coil 57 77 - -
Bisa03g2990 266 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 3 49 IPR002100 GO:0003677|GO:0046983
Bisa03g2990 266 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 148 - -
Bisa03g2990 266 SUPERFAMILY SRF-like 1 86 IPR036879 GO:0003677|GO:0046983
Bisa03g2990 266 SMART madsneu2 1 55 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2990 Bisa-ChrBisa03 49672091 49672891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2990 1 195 Type I MADS-box Gene Family AT5G55690 31.683 1.43e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bisa03g2990 SRF-TF 3.5e-19 No_clan