Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2946 ATGGAACAACCCACCACCACCGCCTCCGCCGCCCCAGCATCCTACCGGGGGGTCCGAATGCGAAAATGGGGCAAATGGGTGTCCGAAATCCGGGAACCCGGCAAGAAGACTCGGATATGGCTAGGTAGCTACGAGTCGCCGGAGATGGCAGCGGCGGCCTATGACGTGGCAGCTTTGCAGCTCCGAGGTCCGGCGGCCAGGCTCAATTTCCCGGAGCTTGCCGGGAGCCTGCCTCGGCCGGTGAGCTCTGCGGCGGAGGATGTGGTGTTGGCAGCTCAACAAGCAGCATTGAGGTTGAGGAGACCGGTGGCCGGAGTGTCACCGGAGGAAGGCGGTGGCGCAGTGGCAGCGCCGGTGAGGGTGTGGCTGTCGGCGAGAGAAATTCAAGCCATAAATGAGTCACCACTGGATTCACCGAAGATGTGGATGCAAATGGCTGCTGAAACTGCCATAATGTTGGGTTTTGACGCTTCTGAGGATTGTGAGTCTATGGAATTTCATGATGAGGATGATGATGTTTTAGGCTTGAGTAGATGCGAAGAAATGCAACACCAGTCGATATGGGACTTCTAA 573 0.5742 MEQPTTTASAAPASYRGVRMRKWGKWVSEIREPGKKTRIWLGSYESPEMAAAAYDVAALQLRGPAARLNFPELAGSLPRPVSSAAEDVVLAAQQAALRLRRPVAGVSPEEGGGAVAAPVRVWLSAREIQAINESPLDSPKMWMQMAAETAIMLGFDASEDCESMEFHDEDDDVLGLSRCEEMQHQSIWDF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2946 190 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
Bisa03g2946 190 PRINTS Ethylene responsive element binding protein signature 53 73 IPR001471 GO:0003700|GO:0006355
Bisa03g2946 190 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Bisa03g2946 190 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Bisa03g2946 190 SUPERFAMILY DNA-binding domain 15 72 IPR016177 GO:0003677
Bisa03g2946 190 Pfam AP2 domain 15 63 IPR001471 GO:0003700|GO:0006355
Bisa03g2946 190 Gene3D AP2/ERF domain 14 72 IPR036955 GO:0003700|GO:0006355
Bisa03g2946 190 FunFam Ethylene-responsive transcription factor 2 13 72 - -
Bisa03g2946 190 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Bisa03g2946 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2946 Bisa-ChrBisa03 48169399 48169971 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2946 12 144 AP2-EREBP Transcription Factor Family AT1G71450 57.664 9.06e-48 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g2946 AP2 5.9e-14 CL0081