Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2943 ATGGAACAACCCACCACCACCGCCACTGCCTCCGTCGCCTCTGACCCGGCCTTCACCTCAGCATCCTACCGGGGGGTCCGAATGCGAAAATGGGGCAAATGGGTGTCTGAAATTAGGGAACCCGGCAAGAAGACCCGGATATGGCTAGGCAGCTACGAGTCGCCGGAGATGGCGGCGGCGGCCTTTGACGTGGCAGCTTTGCAGCTTCGAGGTCGTGCGGCCAGGCTCAATTTCCCAGAGCTTGCCGGGAGCCTGCCTCGGCCGGCGAGCTCTAGGGCCGAAGATGTGGTGTTGGCAGCTCAACAAGCGGCATTGAAGGTGAGGAGACCGGTGGCCGGAGGGTCACCGGAGGCAGAAGGTGGCGCAGTGGCAGCGCCGGCGAGGGTGGGGCTGTCGGCGAGAGAAATTGAGGCCATAAATGAGTCACCACTTGATTCACCGAAGATGTGGATGCAAATGGCTGCTGAAACTGCCATAATGTTGGGTTTTGACGCTTCTGAGGATTGTGAGTCTATGGAATTTCATGATGAGGATGATGATGTTTTAGGCTTGAGTAGATGCGAAGAAATGCAACACCAGTCGATATGGGACTTCTAA 597 0.5729 MEQPTTTATASVASDPAFTSASYRGVRMRKWGKWVSEIREPGKKTRIWLGSYESPEMAAAAFDVAALQLRGRAARLNFPELAGSLPRPASSRAEDVVLAAQQAALKVRRPVAGGSPEAEGGAVAAPARVGLSAREIEAINESPLDSPKMWMQMAAETAIMLGFDASEDCESMEFHDEDDDVLGLSRCEEMQHQSIWDF 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2943 198 PRINTS Ethylene responsive element binding protein signature 61 81 IPR001471 GO:0003700|GO:0006355
Bisa03g2943 198 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Bisa03g2943 198 SUPERFAMILY DNA-binding domain 23 80 IPR016177 GO:0003677
Bisa03g2943 198 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Bisa03g2943 198 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Bisa03g2943 198 Gene3D AP2/ERF domain 22 80 IPR036955 GO:0003700|GO:0006355
Bisa03g2943 198 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Bisa03g2943 198 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 134 - -
Bisa03g2943 198 Pfam AP2 domain 23 71 IPR001471 GO:0003700|GO:0006355
Bisa03g2943 198 FunFam Ethylene-responsive transcription factor 2 21 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2943 Bisa-ChrBisa03 48156767 48157363 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2943 21 152 AP2-EREBP Transcription Factor Family AT1G71450 57.353 6.25e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g2943 AP2 3.7e-12 CL0081