Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2918 ATGCGTGTGCTATACTATAAGGACCAACTTGAGACTCAAATTAAAGATAGAGATAAGCTTAACTTATCCGGAACTAAAAAAAAATCCACTCTACGATTTTCTCATATGGCAAAATCAGATGGAGCTTCAACTTCTGATTTGGAAATGATTCGACAACACCTCCTTGGCGACTTTTCCTCTACAGAATCCTTCATCGCCAAACTCTATCCAGTAAAACTAGAAGATCCATTTCCATTTTCGTACTTCGATCAAAGTCTCTGTACCTTTTTCGAAACCTCTGATCTCGAAGCAGACATGGAGGTCCAGGTGATAGACTCGGCGTCGAAGGAGACGCAGGACGAGAGTAAGCCCACATCGCCTGAGAAACCCGAGTGCGGAGGGGTATTTATACGGCGGTACAGAGGGGTCCGGAGAAGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGTGACCCGACCCGGAAAGGGACCCGGGTGTGGCTGGGCACGTTTGACAGTGAGATTGACGCCGCGAGGGCCTATGATTCTGCTGCTTTCAGAATGAGGGGTCGAAAGGCAATTTTGAATTTTCCGTTGGAGGCTGGAGAGTCCGAGCCCAAGCCCAGGCCCAATTGTTGCGGCCGGAAACGGAGAAGAAGGAGCTCAGACGAAGAGCTCCCACAGGCCACAAGTTTAGTTACGGACTGTGGTTTGAAATCATCAATATCCAAAACTTATTAA 717 0.4881 MRVLYYKDQLETQIKDRDKLNLSGTKKKSTLRFSHMAKSDGASTSDLEMIRQHLLGDFSSTESFIAKLYPVKLEDPFPFSYFDQSLCTFFETSDLEADMEVQVIDSASKETQDESKPTSPEKPECGGVFIRRYRGVRRRPWGKFAAEIRDPTRKGTRVWLGTFDSEIDAARAYDSAAFRMRGRKAILNFPLEAGESEPKPRPNCCGRKRRRRSSDEELPQATSLVTDCGLKSSISKTY 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2918 238 Pfam AP2 domain 132 182 IPR001471 GO:0003700|GO:0006355
Bisa03g2918 238 PRINTS Ethylene responsive element binding protein signature 133 144 IPR001471 GO:0003700|GO:0006355
Bisa03g2918 238 PRINTS Ethylene responsive element binding protein signature 172 192 IPR001471 GO:0003700|GO:0006355
Bisa03g2918 238 FunFam Ethylene-responsive transcription factor 2 131 192 - -
Bisa03g2918 238 MobiDBLite consensus disorder prediction 107 126 - -
Bisa03g2918 238 PANTHER DNA-BINDING DOMAIN 98 210 IPR044808 GO:0003700|GO:0009873
Bisa03g2918 238 SMART rav1_2 132 196 IPR001471 GO:0003700|GO:0006355
Bisa03g2918 238 MobiDBLite consensus disorder prediction 193 218 - -
Bisa03g2918 238 Gene3D AP2/ERF domain 131 192 IPR036955 GO:0003700|GO:0006355
Bisa03g2918 238 CDD AP2 140 190 IPR001471 GO:0003700|GO:0006355
Bisa03g2918 238 ProSiteProfiles AP2/ERF domain profile. 132 190 IPR001471 GO:0003700|GO:0006355
Bisa03g2918 238 SUPERFAMILY DNA-binding domain 132 191 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2918 Bisa-ChrBisa03 47426975 47427905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2918 44 218 AP2-EREBP Transcription Factor Family AT5G07580 44.330 1.65e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g2918 AP2 2.6e-14 CL0081