Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2913 ATGGCTGCTTCTTCCTCCGGCAATTCCTCTGCTTTCCCTCCCAAACCGTTGGAATTCTCGCCCGACATTCCCCGCACTATTCGTCTCACGTCCGATCAGCTCAAGTGCTGCACGCAAGCGCTGACCTTCTTCAGGGAGAAGCTTCAGACTCCTTACAAGATCGGCCAAGAGTTTGCCCACTTGCAGGCGAATAGGATAACACCGAGTGAGATGAGAAGAAGATGCATTGTAGCTCTAAACGATGTAAATGTGAGCAAAAATCGGTATACAGATGTCTTACCATTTGACAAGAACAGGATTGTTCTTGAATCAAGTACAGATTATAGACCTGCAGCCAAGGGATATATCAATGCAAGCTTTGTCTCGACCTCATCCTCTGGAAATGTTTCTCAGTTTATTGCTACACAAGGCCCACTGCCACATACCTATGAGGATTTCTGGGAAATGGTTGTCCAATATCACTGCCCTGCAATTGTGATGCTCACTAGGCTGGTTGACAATTACAAGATGGTAAAATGTGGAGATTATTTTCAAGCTGAAGATGGACCTAGAGAATTTGGTAATATCTCTATTATAAGTAAATGGATAAAAACTACTGAAACTTCACTGGTACTTCGCCATCTGGAGGTAAAGCATAAAGAGCCAGAAGATCCGCCCCTGTCTGTTTTGCATATTCAGTATCCTGAATGGCCTGACCATGGAGTTCCCAAAGATACGTATGCTGTGCGTGAAGTTTTGAAAAGATTATATCATGTACCACCAAACTTAGGCCCAGTAGTGGTGCACTGCAGTGCAGGTATTGGTAGAACTGGAACATACTGTGCAATTCATAACACAATTCAGAGAATCCTTGCTGGTGATATGTCTGCCTTGGATCTTGTGAATACTATAGCTGTCTTCAGGTCCCAGCGTATTGGAATGGTTCAGACACAGGACCAGTACTTTTTCTGCTACAAAGCTATTGTAGATGAACTGGAAGACCTTGTATCTCATCAGCAATAA 1002 0.4371 MAASSSGNSSAFPPKPLEFSPDIPRTIRLTSDQLKCCTQALTFFREKLQTPYKIGQEFAHLQANRITPSEMRRRCIVALNDVNVSKNRYTDVLPFDKNRIVLESSTDYRPAAKGYINASFVSTSSSGNVSQFIATQGPLPHTYEDFWEMVVQYHCPAIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNISIISKWIKTTETSLVLRHLEVKHKEPEDPPLSVLHIQYPEWPDHGVPKDTYAVREVLKRLYHVPPNLGPVVVHCSAGIGRTGTYCAIHNTIQRILAGDMSALDLVNTIAVFRSQRIGMVQTQDQYFFCYKAIVDELEDLVSHQQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2913 333 ProSitePatterns Tyrosine specific protein phosphatases active site. 261 271 IPR016130 GO:0016311|GO:0016791
Bisa03g2913 333 CDD PTPc_plant_PTP1 115 318 - -
Bisa03g2913 333 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 243 315 IPR000387 GO:0016311|GO:0016791
Bisa03g2913 333 ProSiteProfiles PTP type protein phosphatase domain profile. 54 324 IPR000242 GO:0004725|GO:0006470
Bisa03g2913 333 Pfam Protein-tyrosine phosphatase 83 322 IPR000242 GO:0004725|GO:0006470
Bisa03g2913 333 PRINTS Protein tyrosine phosphatase signature 291 306 IPR000242 GO:0004725|GO:0006470
Bisa03g2913 333 PRINTS Protein tyrosine phosphatase signature 220 237 IPR000242 GO:0004725|GO:0006470
Bisa03g2913 333 PRINTS Protein tyrosine phosphatase signature 258 276 IPR000242 GO:0004725|GO:0006470
Bisa03g2913 333 PRINTS Protein tyrosine phosphatase signature 132 152 IPR000242 GO:0004725|GO:0006470
Bisa03g2913 333 PRINTS Protein tyrosine phosphatase signature 114 121 IPR000242 GO:0004725|GO:0006470
Bisa03g2913 333 PRINTS Protein tyrosine phosphatase signature 307 317 IPR000242 GO:0004725|GO:0006470
Bisa03g2913 333 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 43 327 - -
Bisa03g2913 333 SMART PTPc_3 53 326 IPR000242 GO:0004725|GO:0006470
Bisa03g2913 333 SMART ptp_7 221 323 IPR003595 -
Bisa03g2913 333 Gene3D Protein tyrosine phosphatase superfamily 28 326 IPR029021 -
Bisa03g2913 333 FunFam Tyrosine-protein phosphatase non-receptor type 12 31 332 - -
Bisa03g2913 333 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 326 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2913 32 330 Protein tyrosine phosphatase (PTP) family AT1G71860 74.247 1.13e-171 478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2913 03 47244647 47255718 Bisa03g2913 03 47244647 47255718 ECH