Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2893 ATGATTGGCACAAAGACCAGCCCGGACGACGTCGCTTGCCTTGAGGCGATGGTGCTATCAAGTGGCCAGGTGTACCCTGCGGTCCTAAACGCAGCCGTTGAGCTCAATTTATTTGAGATCATCGGTGAGGTTAGCCCTAGGCTCATGTCACCCTCCGAGATTGCCTCTAAGATCCCGGCTCAGCACCCGGACACACCCGGCCGGCTTGATCGGATTCTGTTTCTGCTTGCTAGTTTCTCTCTTCTCAGTTGTTCTAAGCGAGTCCATGAAGATGGCAGGGTCGAGAGACTCTATGGAGTGTCTACCACAGGCCAATACTTTATCGCTAACCAAGATGGTGCCTCCTTTGCTTCACTCACAAAATTGCTTTGCCACCCTGCCTATGCACCAGTACTTTTGCGAAACTTTAAGGAAGTGATTCTTGAGGAGGAAGAGGACCAGTTTAAGAAAATGCATGGGATGTCTTTGTTCGAATACATGAAAAGGGATGAGAAATTGAAAGCTGTGTCCCATAAGGCAATGGCTGATATGACTGCAATTCAGATGAGGCAGATTCTTGAGACATACAAAGGATTTGAGGGAATATCAACACTTGTGGATGTGGGTGGCGGCATTGGCCAAAGCCTCAAAATGATCACTTCTAAGTACCCTTCTATAAAGGGGGAAGAGGAAGAGGTGACAGCAATAGACATTGTAGCCAATGCTTTATGTGGAATTAAGCATGTTGGAGGCGATATGTTCGAATGTGTCCCCGAAGGTGATGCAATAATGGTGAAGGCTGTGACGCATAACTGGAAAGATGAAAAATGCATACAAATTCTGAAGAACTGCCACAAATCCCTGGAGAAAGGTGGGAAGGTGATTGTTGTGGACTTGATAATGCCAGAAATTGTGAAGGATAGTGATGGTGATAAGTATGCTTCCATTATTGACAATATGATGCTTCTCCTAGTTGGTGGAAAGGAAAGGACTGAGAAAGAATTTGCAGCTCTATGCAAAGATGCTGGGTTTTCCAGATATGAAATTATTGCCTCTGGTTTCTCTACTTTGGGAGTCATTGAGTTTTATAAATAA 1074 0.4516 MIGTKTSPDDVACLEAMVLSSGQVYPAVLNAAVELNLFEIIGEVSPRLMSPSEIASKIPAQHPDTPGRLDRILFLLASFSLLSCSKRVHEDGRVERLYGVSTTGQYFIANQDGASFASLTKLLCHPAYAPVLLRNFKEVILEEEEDQFKKMHGMSLFEYMKRDEKLKAVSHKAMADMTAIQMRQILETYKGFEGISTLVDVGGGIGQSLKMITSKYPSIKGEEEEVTAIDIVANALCGIKHVGGDMFECVPEGDAIMVKAVTHNWKDEKCIQILKNCHKSLEKGGKVIVVDLIMPEIVKDSDGDKYASIIDNMMLLLVGGKERTEKEFAALCKDAGFSRYEIIASGFSTLGVIEFYK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2893 357 Gene3D Vaccinia Virus protein VP39 108 357 IPR029063 -
Bisa03g2893 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 357 IPR016461 GO:0008168
Bisa03g2893 357 PIRSF O-mtase 2 357 IPR016461 GO:0008168
Bisa03g2893 357 Pfam Dimerisation domain 28 77 IPR012967 GO:0046983
Bisa03g2893 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 355 IPR029063 -
Bisa03g2893 357 Gene3D - 2 107 IPR036388 -
Bisa03g2893 357 SUPERFAMILY "Winged helix" DNA-binding domain 12 112 IPR036390 -
Bisa03g2893 357 FunFam Caffeic acid 3-O-methyltransferase 1 107 - -
Bisa03g2893 357 PANTHER O-METHYLTRANSFERASE 16 347 IPR016461 GO:0008168
Bisa03g2893 357 Pfam O-methyltransferase domain 136 338 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2893 Bisa-ChrBisa03 46674580 46679591 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2893 9 357 Monolignol Biosynthesis Gene Families AT5G54160 45.763 1.23e-94 285