Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2890 ATGATTGGCACAAAGCCCAGCCCGGACGACGTCGCTTGCCTTGATGCGATGGTGCTATCAAATGGCCAGGTGTTCCCTGCGGTCCTAAACGCAGCCGTTGAGCTCAATTTATTTGAGATCATCGGTGAGGTTAGCCCCAGGCTCATGTCACCCTCCGAGATTGCCTCTAAGCTCCCAGCTCAGCACCCGGACACAGCCGGCCGGCTTGATCGGATTCTGTCTCTGCTTGCTAGTTTCTCTCTTTTCAGTTGTTCTAAGCGAGTCCATGACGATGGCAGGGTCGAGAGACTCTATGGAGTGTCTCCCACAGGCCAATACTTTATCGCTAACCAAGATGGTGCCTCCTTTGCTTCACTCACAAAATTGCTTTGCCACCCTGCCTATGTAGCAGTTTTGCGAAACTTTAAGGAAGTGATTCTTGGGGAGGAGGAGGACCAGTTTAAGAAAGTGCATGGGATGTCTATGGTCGAATACATGAAAAGGGATGGGACATTCGAAGCAGTGTTCCATAAGGCAATGGCTGATATGACAGCAATTCAGATGAGGCAGATTCTTGAGACATACAAAGGATTTGAGGGAATATCAACGCTTGTGGATGTGGGTGGTGGCATTGGCCAAAGCCTCAAAATGATCACTTCTAAGTACCCTTCTATAAAGGGCATCAACTTCGATTTGCCCCACGTTCTAGAACTTGCTCCATCATACCCAGGAATTAAGCATGTTGGAGGCGATATGTTCGAATGTGTCCCCGAAGGTGATGCAATAATGGTGAAGTATGTGACGCATAACTGGAAAGATGAAAAATGCATACAAATTCTGAAGAACTGCCATAAATCCCTAGAGAAAGGTGGGAAGGTGATTGTTGTGGACTTCATAATGCCAGAAATTGTGAAGGAAAGTGATGGTGATAAGCAAGCTTCCATTGTTGACAATATAATGCTTCTCCTAGTTGGTGGAAAGGAAAGGACTGAGAAAGAATTTGCAGCTCTATGCAAAGATGCTGGGTTTTCCAGATATGAAATTGTTGCCTATGTTTTCTCTACTTTGGGAGTCATTGAGTTTTATAAATAA 1071 0.4566 MIGTKPSPDDVACLDAMVLSNGQVFPAVLNAAVELNLFEIIGEVSPRLMSPSEIASKLPAQHPDTAGRLDRILSLLASFSLFSCSKRVHDDGRVERLYGVSPTGQYFIANQDGASFASLTKLLCHPAYVAVLRNFKEVILGEEEDQFKKVHGMSMVEYMKRDGTFEAVFHKAMADMTAIQMRQILETYKGFEGISTLVDVGGGIGQSLKMITSKYPSIKGINFDLPHVLELAPSYPGIKHVGGDMFECVPEGDAIMVKYVTHNWKDEKCIQILKNCHKSLEKGGKVIVVDFIMPEIVKESDGDKQASIVDNIMLLLVGGKERTEKEFAALCKDAGFSRYEIVAYVFSTLGVIEFYK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2890 356 SUPERFAMILY "Winged helix" DNA-binding domain 12 112 IPR036390 -
Bisa03g2890 356 Gene3D - 2 107 IPR036388 -
Bisa03g2890 356 PIRSF O-mtase 2 356 IPR016461 GO:0008168
Bisa03g2890 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 354 IPR029063 -
Bisa03g2890 356 FunFam Caffeic acid 3-O-methyltransferase 2 107 - -
Bisa03g2890 356 Pfam Dimerisation domain 28 77 IPR012967 GO:0046983
Bisa03g2890 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 356 IPR016461 GO:0008168
Bisa03g2890 356 Pfam O-methyltransferase domain 137 337 IPR001077 GO:0008171
Bisa03g2890 356 Gene3D Vaccinia Virus protein VP39 108 356 IPR029063 -
Bisa03g2890 356 PANTHER O-METHYLTRANSFERASE 17 344 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2890 Bisa-ChrBisa03 46617736 46622259 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2890 9 356 Monolignol Biosynthesis Gene Families AT5G54160 50.000 1.09e-111 328