Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2888 ATGGTGTACCCTGCCGTCCTAAACGCTGCGGTTGAGCTCAATGTGTTTGATATCATCGGTGAGGTTAGCCCTAGGCTCATGTCACCCACCGAAATCGCCTCTAAGCTCCCGGCTCAGCACCCGGACACACCCGGCCGGCTCGACCGGATACTATTTTTGCTTGCTAGTTTCTCTCTTCTCAGTTGTTCCAAGCGAGTCCATGAAGATGGTAGGGTTGAGAGGCTCTATGGAGTGTCTCCCACAGGCCAATACTTCATGGCTAACCAAGATGGTGCCTCCTTTGCTTCACTCATAAAATTTCGTTGCTACCCTGCCTCTGTAGCAATTTATCGAAATTTTAAGGAAGTGATTCTTGAGGAGGAAGAGGACCTGTTTAAGAAAGTGCATGGGATGTCTATGTTCGAATACATGAAAAAGGATGGCACATACAAAGCTGTGTTCCATAAGGCAATGGCAGATATGACTGCATTTCAGATGAGGCAGATTCTTGAGACATACAAAGGATTTGAGGGAATATCAACACTTGTGGATGTGGGTGGTGGCATTGGCCAAAGCCTCAAAATGATCACTTCTAAGTACCCTTCTATAAAGGGTATCAACTTCGATTTGCCCCACGTGGTAGAACTTGCTCCATCATACTCAGGAATTAAGCATGTTGGAGGCGATATGTTCGAACGTGTCCCCGAAGGTGATGCAATAATGATGAAGGCTGTGACGCATGACTGGAAAGATGAAAAATGCATACAAATTCTGAAGAACTGCCATAAATCCCTAGAGAAAGGTGGGAATGTGATTGTTGTGGACTTGATAATGGCAGAAATTGTGAAGGAAAGTGATGGTGATAAGTATGCTTCCATTGTTGACAATACGATGTTTCTCCTAGCTGGAGGAAAGGAAAGGACTGAGAAAGAATTTGCAGCTCTGTGCAAAGGTGCTGGGTTTTCCAGATATGAAATTATTGCCTCTGGTTTCTCTGCTTTGGGAGTCATTGAGTTTTATAAATAA 1005 0.4458 MVYPAVLNAAVELNVFDIIGEVSPRLMSPTEIASKLPAQHPDTPGRLDRILFLLASFSLLSCSKRVHEDGRVERLYGVSPTGQYFMANQDGASFASLIKFRCYPASVAIYRNFKEVILEEEEDLFKKVHGMSMFEYMKKDGTYKAVFHKAMADMTAFQMRQILETYKGFEGISTLVDVGGGIGQSLKMITSKYPSIKGINFDLPHVVELAPSYSGIKHVGGDMFERVPEGDAIMMKAVTHDWKDEKCIQILKNCHKSLEKGGNVIVVDLIMAEIVKESDGDKYASIVDNTMFLLAGGKERTEKEFAALCKGAGFSRYEIIASGFSALGVIEFYK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2888 334 Gene3D - 2 162 IPR036388 -
Bisa03g2888 334 SUPERFAMILY "Winged helix" DNA-binding domain 2 90 IPR036390 -
Bisa03g2888 334 PIRSF O-mtase 1 334 IPR016461 GO:0008168
Bisa03g2888 334 Pfam O-methyltransferase domain 110 315 IPR001077 GO:0008171
Bisa03g2888 334 Gene3D Vaccinia Virus protein VP39 144 320 IPR029063 -
Bisa03g2888 334 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 334 IPR016461 GO:0008168
Bisa03g2888 334 FunFam Caffeic acid 3-O-methyltransferase 1 85 - -
Bisa03g2888 334 PANTHER O-METHYLTRANSFERASE 4 324 IPR016461 GO:0008168
Bisa03g2888 334 Pfam Dimerisation domain 6 55 IPR012967 GO:0046983
Bisa03g2888 334 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 92 332 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2888 Bisa-ChrBisa03 46553125 46556960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2888 2 334 Monolignol Biosynthesis Gene Families AT5G54160 48.657 8.96e-106 312