Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2887 ATGAAGAACCCCATCGTCACCGTGGAGAAGAAACACGTGAACGGCGACGATCACTTCGATCCTTGCCTTCGCGCCGCGCTTCTGGCGGCTTCTCAGACGTCATCCGCAGTCCTATTCGCAGCCATTGACCTGAAGCTCTTCGACATAATCGCAAACATACAACAAGAAGAAGGAGATTATTGTGCCTATGTATCTCCGGTTGAGATAGCTTCTCGGATTCCGACTCGGAACGCCGACGCGCCGAGGAAGCTGGATCGGATGATGCGGCTGCTGGCGAGTTATTCTCTGCTGACGTGCGCCGGGAGATCCGACGGTGAGGGCAACGTGGAGAGGGTGTATGGAATCTCGGCCGTTGGTAGGTTCTTCGTGACCAAAGAGGAGGGCCCCACCTGGGCTTCTGTATTCCCTGGCCTCAGCTACGATCCCTCCATGGCCGATGTCTGGTTGAATGTGAAGGATGCAATTGTTGAGGGTGATGTGGATCTGGTTCAAAAGATGAAAGGGCAAACATGGTACCAGTACATGATGCAAAGTCCAGCAATGAAGCTGTTTCAAAGAGCCATGGCAGATATGTCTGCTCTGCACATGGAGAAGGTTCTTGAGATATACAAAGGGTTTGAGGGATTATCAAATTCAACACTTGTGGATGTGGCAGGGATAGAGCATATTGGAGGGGACATGTTCCAAAGTGTCCCAAAAGGAGATGCTATAATGGTAAAGGGTACAACTCATAATTGGTCATATGAGAAATGCATAAAACTGTTCAAGAACTGCTATGAAAAACTGGAGAAAGGTGGAAAGGTCATTGTGATTGACATGATAATGCCAGAAGAAGCAGATGTAAGCAGTGCCACTAAGAACATTGCACTTTTTGACAATGTGATGTTAGCAGAAGGAAATGGAAGAGAAAGAAATGAGAAGGAGTTTGAAGCTTTGTGCAAAACATCTGGGTTTTCTCAATTTAAGGTTGCTTGTTATGCTATGTCTCTCTTGGGAGTCATGGAATTTTATAAGTAA 1017 0.47 MKNPIVTVEKKHVNGDDHFDPCLRAALLAASQTSSAVLFAAIDLKLFDIIANIQQEEGDYCAYVSPVEIASRIPTRNADAPRKLDRMMRLLASYSLLTCAGRSDGEGNVERVYGISAVGRFFVTKEEGPTWASVFPGLSYDPSMADVWLNVKDAIVEGDVDLVQKMKGQTWYQYMMQSPAMKLFQRAMADMSALHMEKVLEIYKGFEGLSNSTLVDVAGIEHIGGDMFQSVPKGDAIMVKGTTHNWSYEKCIKLFKNCYEKLEKGGKVIVIDMIMPEEADVSSATKNIALFDNVMLAEGNGRERNEKEFEALCKTSGFSQFKVACYAMSLLGVMEFYK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2887 338 PIRSF O-mtase 218 338 IPR016461 GO:0008168
Bisa03g2887 338 PIRSF O-mtase 6 220 IPR016461 GO:0008168
Bisa03g2887 338 PANTHER O-METHYLTRANSFERASE 27 325 IPR016461 GO:0008168
Bisa03g2887 338 SUPERFAMILY "Winged helix" DNA-binding domain 16 125 IPR036390 -
Bisa03g2887 338 Gene3D Vaccinia Virus protein VP39 130 218 IPR029063 -
Bisa03g2887 338 Gene3D - 6 122 IPR036388 -
Bisa03g2887 338 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 220 338 IPR016461 GO:0008168
Bisa03g2887 338 Pfam Dimerisation domain 37 92 IPR012967 GO:0046983
Bisa03g2887 338 Pfam O-methyltransferase domain 219 319 IPR001077 GO:0008171
Bisa03g2887 338 Gene3D Vaccinia Virus protein VP39 219 326 IPR029063 -
Bisa03g2887 338 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 336 IPR029063 -
Bisa03g2887 338 FunFam Caffeic acid 3-O-methyltransferase 6 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2887 Bisa-ChrBisa03 46529430 46533642 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2887 24 330 Monolignol Biosynthesis Gene Families AT5G54160 39.655 1.51e-75 235