Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2876 ATGGGTTCGACTTCCACTGAGAATCAGAATCTCAGTGCTTCATCTTCTCAAACAGAGGACGAGGCCTGCCTCTCCGCCATGTACCTCACGACCAATCAGGTCTATCCAGCTGTCCTCAACGCAGCCATTGATCTCGGCCTCTTCGACATCATTGCCAATAAGGCCTCGCCACCCGGCGCCTTCATGTCGGCGCGGGAGATCGCGTCCCACCTGCCGTCCCAGCACCCCGACATGCCCGACAGGCTCGAGCGCATGCTGCGATTGCTGGCCAGCTACACCCTTCTGACGTGCTCCTCACGCACCGCCGAAGACGGCACCTCCATCACCGTGTACGGCCTTTCATCGGCTGGCAAGTACTGTGTCACCGATGAAACTGGAGGCTACCTGGCTTCCTTCACCACGTTCCTCTGTTACAAAGCTCTCTTAGAAATTTGGATGAATTTCAAGGAAGCAGTGGTGGACCCTGATATCGACCTGTTCAAGAAGGTGCATGGAAAGACGAGTTACGAGTACTTTGGCACAGACCCGAAGTTGAACCACATCTTCAACAAGGCCATGGCTGACGTGTGCGCCGTCGAGATGAGGAGGCTCCTTCAAATCTACAAAGGCTTCGACGGAATCTCGACGTTGGTCGACGTCGGAGGTGGCAACGGCCAGAACCTAAAGCTCATCATCTCCAACTACCCCTCCATTAAGGGCATCAACTTCGACCTCCCTCAAGTCATTGAGCATGCCCCACCCATCCCTGGAATCGAGCATATTGGAGGAGACATGTTTGCGAGCGTCCCAAAAGGTGATGCCATAATACTAAAGGCCGTGTGCCATAACTGGTCAGACGAGAAGTGCGTAGAATTTCTGAGAAAGTGTCACGAAGCTTTGCCGGAGAACGGGAAGGTAATAATTGTCGAGTTCATATTACCAGAATCCCCAGAGCCCACGGAAGCATCGAAGCTAGTTTCCACGTTGGACAACCTCATGTTCATCACTGTGGGAGGAAGAGAAAGGACAGAGAAGCAGTTCGAGAGTTTGGGAAAGCGTTCTGGCTTTTCTAGATTCCAGGTTGCCAGTCGTGCCTTCTCTGCTTTGGGAGTTGTCGAGTTTTACAAATAA 1110 0.5279 MGSTSTENQNLSASSSQTEDEACLSAMYLTTNQVYPAVLNAAIDLGLFDIIANKASPPGAFMSAREIASHLPSQHPDMPDRLERMLRLLASYTLLTCSSRTAEDGTSITVYGLSSAGKYCVTDETGGYLASFTTFLCYKALLEIWMNFKEAVVDPDIDLFKKVHGKTSYEYFGTDPKLNHIFNKAMADVCAVEMRRLLQIYKGFDGISTLVDVGGGNGQNLKLIISNYPSIKGINFDLPQVIEHAPPIPGIEHIGGDMFASVPKGDAIILKAVCHNWSDEKCVEFLRKCHEALPENGKVIIVEFILPESPEPTEASKLVSTLDNLMFITVGGRERTEKQFESLGKRSGFSRFQVASRAFSALGVVEFYK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2876 369 Gene3D - 2 120 IPR036388 -
Bisa03g2876 369 FunFam Caffeic acid O-methyltransferase 123 369 - -
Bisa03g2876 369 SUPERFAMILY "Winged helix" DNA-binding domain 19 124 IPR036390 -
Bisa03g2876 369 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
Bisa03g2876 369 Gene3D Vaccinia Virus protein VP39 121 369 IPR029063 -
Bisa03g2876 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 369 IPR016461 GO:0008168
Bisa03g2876 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 358 IPR029063 -
Bisa03g2876 369 CDD AdoMet_MTases 209 306 - -
Bisa03g2876 369 FunFam Caffeic acid 3-O-methyltransferase 3 120 - -
Bisa03g2876 369 PANTHER O-METHYLTRANSFERASE 26 359 IPR016461 GO:0008168
Bisa03g2876 369 Pfam Dimerisation domain 38 90 IPR012967 GO:0046983
Bisa03g2876 369 PIRSF O-mtase 3 369 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2876 Bisa-ChrBisa03 46222672 46224144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2876 18 369 Monolignol Biosynthesis Gene Families AT5G54160 48.442 3.62e-120 350