Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2874 ATGCGTTCGACTTCCACCGAGAATCAGAATCTCAGAGCTTCGTCTTCTCAAACAGAGGACGAGGCATGCCTCTCCGCCATGTACCTCACGACCAATCAGGTCTATCCAGCTGTCCTCAACGCAGCCATTGATCTCGGCCTCTTCGACATCATAGCCAATAAGGCCTCGCCACCTGGCGCCTTCATGTCGGCCCTTGAGATTGCGTCCCACCTGCCGTCCCAGCACCCTGACATGGCCGACAGGCTCGACCGCATGCTGCGATTGCTGGCCAGCTACACCCTCCTCACCTCCTCCTCACGCGCCGACGAAGACGGGACCACCGTCCCTGTGTACGCCCTTTCACCGGCCGGCAAGTACTGTGTCACCGATGAAACTGGAGGCTACTTGGCTTCCCTCACCACCTTCCTCTGTTACAAAGCTCTCTTAGAAATTTGGATGAATTTCAAGGAAGTAGTGGTGGACCCTGAAGTCGACCTGTTCAAGAAGGCTGTGTGCCATAACTGGTCAGACGAGAAGTGCATAGAATTAATGAGCAAGTGTTACGACGCACTGCCTGAGAACGGGAAGTTGATAGTGGTGGAGTTCATATTAACAGAATCCCCAGAGCCCACGGAAGCATCAAAATTTGTTTCGACTATGGACAATATGATGTTCATAACTGTGGGAGGAAGGGAAAAGACAGAGAAACAGTTCGAGAATTTAGGAAAACGTTCTGGGTTTTCTAGGTTCCAAGTTGCCTGTCGTGCTTTCTCTGCTTTGGGAGTCTTCGAGTTTTATAAATAA 783 0.5134 MRSTSTENQNLRASSSQTEDEACLSAMYLTTNQVYPAVLNAAIDLGLFDIIANKASPPGAFMSALEIASHLPSQHPDMADRLDRMLRLLASYTLLTSSSRADEDGTTVPVYALSPAGKYCVTDETGGYLASLTTFLCYKALLEIWMNFKEVVVDPEVDLFKKAVCHNWSDEKCIELMSKCYDALPENGKLIVVEFILTESPEPTEASKFVSTMDNMMFITVGGREKTEKQFENLGKRSGFSRFQVACRAFSALGVFEFYK 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2874 260 Gene3D - 32 157 IPR036388 -
Bisa03g2874 260 Pfam O-methyltransferase domain 155 241 IPR001077 GO:0008171
Bisa03g2874 260 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 260 IPR016461 GO:0008168
Bisa03g2874 260 Gene3D Vaccinia Virus protein VP39 158 249 IPR029063 -
Bisa03g2874 260 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 162 257 IPR029063 -
Bisa03g2874 260 Pfam Dimerisation domain 38 90 IPR012967 GO:0046983
Bisa03g2874 260 PANTHER O-METHYLTRANSFERASE 155 250 IPR016461 GO:0008168
Bisa03g2874 260 FunFam Caffeic acid 3-O-methyltransferase 3 120 - -
Bisa03g2874 260 SUPERFAMILY "Winged helix" DNA-binding domain 19 124 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2874 Bisa-ChrBisa03 46184828 46186846 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2874 159 260 Monolignol Biosynthesis Gene Families AT5G54160 43.689 1.28e-24 99.0