Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2853 ATGGGGGCCACGAATCTTCTCGTGTTCTTCTTGTCTGTGATGGCTGCATGCTATATGGCAGCGGCCAAGGTGGTGCTGATTGGGAGCAATATTACTGTGTCCTTCGATGATATTGAAGCTAATTTCGCTCCAACGATGAAAGGTTCTGGAGAATGTGGGATCTTGTATGTGGCAGAGCCACGTGATGCTTGTACAGCACTGACAAATAAAGCTGAAAAGGTTTCAAATTCAAGTTCTCCTTTTGTTTTAATAATTAGAGGGGAATGTAGCTTTGAAGAGAAGGTGAGAAGAGCACAAGAGGCAGGTTACAAAGCTGCAATAGTCTATGACAATGAAGAGGATGGCGTCTTAGTTGCAATGGCAGGAAATTCAGCTGGTATAAAAACACATGCAGTATTTGTATCTAAAGCTTCAGGTGAAATACTGAAAACATATGCTGGACTGAGTAACATTGAAGTCTGGCTAATTCCAAGTTTTGAAAACTCAGCATGGTCTATCATGGCAATTTCTTTCATTTCCCTGCTAGCAATGTCGGCAGTTCTGGCTACTTGTTTCTTTGTCCGTAGGCATCGCATACGAAGAGAAAGGCCTCAAGCTAGTAATGTTCGTGAATTTCATGGGATGAGTAGTCGCCTTGTAAAAGCAATGCCTAGTTTGATATTTTCTTCTGTTTTAGAGGATAACTGTACATCAAGAACATGTGCAATATGCCTTGAAGACTATAGCGTTGGAGAAAAGCTCAGGGTTCTGCCCTGCTGTCACAAGTTTCATGCCAGCTGTGTGGATTCATGGCTTACTTCATGGAGAACATTTTGCCCAGTTTGTAAGCGTGATGCAAGAACTGGTCTAGCTGAGCCACCACCTTCGGAATCCACTCCTTTGCTTTCTTCATCTGTGGCATCCTCTGTAGCATCATCTGTGAGATCATCACTAGGATCATCTTCAGCAATACAAATTGCCCGGACTACATGGTCACCATCTGTTTCTCGTCGCCACTCTCTTGCTAGTACTCCTCCTGTTTCTCATCACAACTCTCTTGCTAGTACTTCATCTGTTTCTCGTCACCACTCTCTTGCTAGTACTCCCTACGTTCAACCATCTCTTCAGTCCTACCACCAGTCCCCCTCCATAAGTGTTAGCCGAAGCTCAGTAGATATTAGGAATGCATCCCAAAGATCTCAAGCTTCTCATTTGAATTCTCCATGTTCCATGGGTTACCCGTCATTGTCATCGATGAACATGAGGTACATGTCTCCACATATTCATAGTCCAAGCTATGCTTCAGCAAGTTACATCGGTTCTTCTAGTAATCAGCACCACCTGCTTCGATATAGCGAGTCAGCTACGAGTATTTCACCATTTGCTTCTGCCCAGTCCCTTCCGGAATGCTGA 1392 0.4397 MGATNLLVFFLSVMAACYMAAAKVVLIGSNITVSFDDIEANFAPTMKGSGECGILYVAEPRDACTALTNKAEKVSNSSSPFVLIIRGECSFEEKVRRAQEAGYKAAIVYDNEEDGVLVAMAGNSAGIKTHAVFVSKASGEILKTYAGLSNIEVWLIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPQASNVREFHGMSSRLVKAMPSLIFSSVLEDNCTSRTCAICLEDYSVGEKLRVLPCCHKFHASCVDSWLTSWRTFCPVCKRDARTGLAEPPPSESTPLLSSSVASSVASSVRSSLGSSSAIQIARTTWSPSVSRRHSLASTPPVSHHNSLASTSSVSRHHSLASTPYVQPSLQSYHQSPSISVSRSSVDIRNASQRSQASHLNSPCSMGYPSLSSMNMRYMSPHIHSPSYASASYIGSSSNQHHLLRYSESATSISPFASAQSLPEC 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2853 463 Pfam Ring finger domain 233 276 IPR001841 -
Bisa03g2853 463 Gene3D - 11 156 - -
Bisa03g2853 463 MobiDBLite consensus disorder prediction 328 352 - -
Bisa03g2853 463 MobiDBLite consensus disorder prediction 368 402 - -
Bisa03g2853 463 SUPERFAMILY PA domain 81 161 IPR046450 -
Bisa03g2853 463 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 158 291 - -
Bisa03g2853 463 ProSiteProfiles Zinc finger RING-type profile. 234 276 IPR001841 -
Bisa03g2853 463 Pfam PA domain 61 142 IPR003137 -
Bisa03g2853 463 CDD PA_C_RZF_like 20 163 IPR044744 -
Bisa03g2853 463 SUPERFAMILY RING/U-box 216 284 - -
Bisa03g2853 463 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 194 281 - -
Bisa03g2853 463 SMART ring_2 234 275 IPR001841 -
Bisa03g2853 463 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 22 156 - -
Bisa03g2853 463 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 281 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2853 Bisa-ChrBisa03 45657236 45661829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2853 21 462 C3H Transcription Factor Family AT1G22670 46.756 2.01e-111 333