Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2845 ATGTCTGGCAGCTCAAGTAGAACTGTTTACATAGGCAATCTAGATGAGCGGGTAACCGACAGGGTCTTGTATGATATTTTAATTCAAGCAGGACGAGTGGTGGACCTGTATATTCCTAGAGATAAGGAATCTGAAAAACCTAAAGGTTTCGCCTTTGCAGAATATGAAACTGAGGAGATTGCAGAGTATGCAGTCAGGCTTTTCTCAGGCCTGGTGACACTCTACAACAGAACACTAAAGTTTGCCATATCTGGGCAAGACAAACCTTCACCAAATGGTTCTACAGCAGCTACGCCCACATCAAATCCTTCTCACCGACCAAGGCCTTACCCTGCTCCAACACATAATACAGAAATTTCTCAGCACTCTGCTAGGCTATTAACACCTAGCCGATTTTCAGATTCCCCTGTAAATTACTCCCGAGTTACCCATCAGGTAGTTGACAAATCTGGTGGGTATGGATCACTCTACAATGGGAATGATTATGAATACAGTCGAAGAGTCTTTGGGCCAACATTGGATAGCATTAGCCGTTCTAGATCACGCCGCTATGATACAAGTAACCCAATCTTTTATCCATCTCACTAA 588 0.4354 MSGSSSRTVYIGNLDERVTDRVLYDILIQAGRVVDLYIPRDKESEKPKGFAFAEYETEEIAEYAVRLFSGLVTLYNRTLKFAISGQDKPSPNGSTAATPTSNPSHRPRPYPAPTHNTEISQHSARLLTPSRFSDSPVNYSRVTHQVVDKSGGYGSLYNGNDYEYSRRVFGPTLDSISRSRSRRYDTSNPIFYPSH 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2845 195 Gene3D - 2 92 IPR012677 -
Bisa03g2845 195 MobiDBLite consensus disorder prediction 83 103 - -
Bisa03g2845 195 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 1 190 - -
Bisa03g2845 195 SUPERFAMILY RNA-binding domain, RBD 4 96 IPR035979 GO:0003676
Bisa03g2845 195 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 86 IPR000504 GO:0003723
Bisa03g2845 195 SMART rrm1_1 8 82 IPR000504 GO:0003723
Bisa03g2845 195 MobiDBLite consensus disorder prediction 83 121 - -
Bisa03g2845 195 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 80 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2845 Bisa-ChrBisa03 45563472 45565888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2845 8 87 Eukaryotic Initiation Factors Gene Family AT1G49760 30.000 1.08e-06 46.6