LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa03g2819	ATGCCGCCGCCGCTCAGGTCCTACGTGCTCACTGAATCGCCCATTCCGAAATTCATGGGTTACTCTCAGTTCTATGTTCTTTTGCTTTTATGGGTTTCTCTGAAAATTTGTTTAGCCTCCTCCCCCATTGAAGATCAGAAAAGAGATAAGATAACCCATTTACCGGGACAGCCAAAAGATGTAGGATTTGCTCAGTACTCTGGTTATGTGACTGTGAATAAGCAAGCTGGGAGGGCATTATTTTACTGGTTGACCGAGTCACCTGCAAGTCTTGAACCCAAGTCCAGGCCGCTTGTTTTGTGGCTCAATGGGGGCCCTGGATGCTCGTCTATTGCTTATGGTGCAGCTGAAGAGATTGGCCCTTTTCGCATTAACCCTGATGGCAAGTCACTTTACTTGAATCCTTATGCTTGGAACAAATTGGCCAATATACTTTTCCTTGAGTCTCCTGCCGGTGTTGGTTTTTCATATTCCAACAGCACATCGGATCTGTACACAGCGGGTGACCAGAGGACAGCTGAAGATGCTTATGCATTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGATTTTTACATTGCTGGAGAAAGTTACGCAGGTCACTATGTTCCTCAATTGGCTCAAATTGTTTACCAGAAAAATAAGGGAGTCCAGAATCCGGTTATAAACTTCAAGGGATTTATGGTTGGAAATGCTGTCACTGATGATTACCATGATTATGTTGGCACATTCGAGTATTGGTGGACCCATGGTTTGATTTCAGATTCCACATATAAGACGCTACAAATTGCCTGTGAGTTTGGCTCCTCTGAGCATCCATCAATACATTGCATGGAGGCTCTAAAAGTTGCATTTTTGGAGCAGGGAAACATTGACCCATATAGCATATATACACGGCCATGTAGTGATACTATATCTCTCAAACGCAGCTTGGGTGGTCGCTATCCGTGGATGTCTCGAGCTTATGATCCTTGTACTGAGAGGTATTCAGACTTGTATTTCAATCATCCTGAAGTTCAGGACGCACTCCATGCCAATGTGACTGGTATCCCTTATGCATGGAAGACATGCAGTGACATTGTTGGGAATGACTCCTGGGCGGATTCTCCACTATCAATGCTTCCAATATATCAAGAACTCATGGACGCTGGGCTCAAGATATGGGTGTACAGTGGAGACACAGATTCAGTGGTTCCAATAACTGCCACTCGATATTCTATTGATGCCTTGAACCTTCCTACCATCATCAACTGGTATCCTTGGTACGATAATGGCAAGGTTGGTGGGTGGAGCCAAGTTTATAAAGGACTCACATTAGTTACAGTAAGAGGAGCAGGACATGAGGTTCCTCTTCATCGTCCTCGCCAAGCATTCATTCTTTTCAGGTCATTCTTGGAGAACAAGGCCATGCCAACTTGA	1431	0.4423	MPPPLRSYVLTESPIPKFMGYSQFYVLLLLWVSLKICLASSPIEDQKRDKITHLPGQPKDVGFAQYSGYVTVNKQAGRALFYWLTESPASLEPKSRPLVLWLNGGPGCSSIAYGAAEEIGPFRINPDGKSLYLNPYAWNKLANILFLESPAGVGFSYSNSTSDLYTAGDQRTAEDAYAFLVNWFERFPQYKHRDFYIAGESYAGHYVPQLAQIVYQKNKGVQNPVINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLISDSTYKTLQIACEFGSSEHPSIHCMEALKVAFLEQGNIDPYSIYTRPCSDTISLKRSLGGRYPWMSRAYDPCTERYSDLYFNHPEVQDALHANVTGIPYAWKTCSDIVGNDSWADSPLSMLPIYQELMDAGLKIWVYSGDTDSVVPITATRYSIDALNLPTIINWYPWYDNGKVGGWSQVYKGLTLVTVRGAGHEVPLHRPRQAFILFRSFLENKAMPT	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa03g2819	476	SUPERFAMILY	alpha/beta-Hydrolases	46	474	IPR029058	-
	Bisa03g2819	476	Gene3D	-	377	470	-	-
	Bisa03g2819	476	PRINTS	Carboxypeptidase C serine protease (S10) family signature	147	157	IPR001563	GO:0004185\|GO:0006508
	Bisa03g2819	476	PRINTS	Carboxypeptidase C serine protease (S10) family signature	134	146	IPR001563	GO:0004185\|GO:0006508
	Bisa03g2819	476	PRINTS	Carboxypeptidase C serine protease (S10) family signature	441	454	IPR001563	GO:0004185\|GO:0006508
	Bisa03g2819	476	PRINTS	Carboxypeptidase C serine protease (S10) family signature	183	208	IPR001563	GO:0004185\|GO:0006508
	Bisa03g2819	476	Pfam	Serine carboxypeptidase	55	471	IPR001563	GO:0004185\|GO:0006508
	Bisa03g2819	476	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	50	458	IPR001563	GO:0004185\|GO:0006508
	Bisa03g2819	476	FunFam	Carboxypeptidase	377	471	-	-
	Bisa03g2819	476	FunFam	Carboxypeptidase	45	307	-	-
	Bisa03g2819	476	ProSitePatterns	Serine carboxypeptidases, serine active site.	197	204	IPR018202	GO:0004185
	Bisa03g2819	476	ProSitePatterns	Serine carboxypeptidases, histidine active site.	441	458	IPR033124	GO:0004185
	Bisa03g2819	476	Gene3D	-	329	365	-	-
	Bisa03g2819	476	Gene3D	alpha/beta hydrolase	45	307	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa03g2819	Bisa-ChrBisa03	45093995	45101735	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa03g2819	339	474	Calmodulin-binding Proteins	AT2G22960	29.927	3.30e-14	69.3

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa03g2819	03	45093995	45101735	Bisa03g2819	03	45093995	45101735	ECH