Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2798 ATGGCTAAGGACGTTGAGGTTGTAGAGCGAGGGTCGTACTCCGCCAAGGACTACCACGACCCGCCGCCGGCGCCCCTCGTCGACTTCGAGGAGCTCACCAAGTGGTCCTTCTACAGGGCTCTGATTGCTGAGTTCATAGCCACCTTGCTCTTCCTCTACATTACGGTCCTGACCGTGATTGGCTACAAGAGCCAGGCCGACCAGAACACCGATCCTTGCGCTGGCGTCGGCATTCTCGGCATCGCCTGGGCCTTCGGTGGCATGATCTTCATCCTCGTTTACTGCACCGCTGGAATTTCAGGAGGCCACATCAACCCAGCAGTGACATTCGGGCTCTTCTTGGCTCGCAAGGTGTCACTGCTCAGAGCCATCTTTTACATGCTGGCTCAGTGTTTGGGGGCTATCTGTGGAGTTGGGTTAGTGAAGGCGTTCCAGAAGGCTTACTACCAGAAGTATGGTGGTGGCGCCAACGAGCTCTCCGCCGGCTACAGCACTGGCGTCGGCTTAGGCGCTGAGATTATCGGAACCTTTGTTCTGGTGTACACAGTGTTCTCTGCTACTGATCCCAAGAGGAACGCCAGAGATTCCCATGTGCCAGTCTTGGCTCCACTTCCCATTGGCTTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCGGTCACCGGCACCGGCATCAACCCCGCGAGGAGTCTTGGAGCTGCTGTTATCTACAACCAACAGAAATCCTGGGATGACCAATGGATTTTCTGGGTTGGACCATTCATTGGAGCAGCCATAGCAGCCTTCTACCATCAATTCATCTTAAGGGCAGGTGCAGCTAAGGCTCTTGGATCCTTCAGGAGCAACCCTTCCGTTTGA 858 0.5536 MAKDVEVVERGSYSAKDYHDPPPAPLVDFEELTKWSFYRALIAEFIATLLFLYITVLTVIGYKSQADQNTDPCAGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLLRAIFYMLAQCLGAICGVGLVKAFQKAYYQKYGGGANELSAGYSTGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNQQKSWDDQWIFWVGPFIGAAIAAFYHQFILRAGAAKALGSFRSNPSV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2798 285 Pfam Major intrinsic protein 31 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g2798 285 FunFam Probable aquaporin PIP1-2 24 283 - -
Bisa03g2798 285 SUPERFAMILY Aquaporin-like 30 269 IPR023271 -
Bisa03g2798 285 Gene3D Glycerol uptake facilitator protein. 24 285 IPR023271 -
Bisa03g2798 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 279 IPR034294 -
Bisa03g2798 285 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Bisa03g2798 285 NCBIfam MIP family channel protein 43 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g2798 285 CDD MIP 39 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g2798 285 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g2798 285 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g2798 285 PRINTS Major intrinsic protein family signature 171 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g2798 285 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g2798 285 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g2798 285 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2798 Bisa-ChrBisa03 44456900 44460698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2798 1 285 Major Intrinsic Protein MIP AT3G53420 80.139 2.09e-170 471
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2798 03 44456900 44460698 Bisa03g2798 03 44456900 44460698 ECH