Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2784 ATGGAATTCCCGAAGGCTAATGGAGAATACATCAATGGCGCAAACGCGATGGAGCTCTGCAATGGCGTTGGAGGAAGCAAGGATCCTCTGAATTGGGGAATGGCGGCGGAGGCGCTGAAGGGGAGCCATCTGGAGGAGGTGAAGCGGATGGTGGAGGAGTACCGGAGGCCAGTAGTGCGGCTCGCCGGGAAGAGCCTGACGATATCGCAGGTGGCGGCAATCGCCGGCCACGACACCGGCGTGGCCGTGCAGCTGTCGGAGGAGGCCCGCGCCGCTGTGAACGCCAGCAGTGATTGGGTCATGGAAAGCATGAACAAAGGCACCGACAGTTATGGCGTCACCACGGGATTCGGTGCGACGTCGCACAGGCGAACCAAGCAGGGCGGAGCCCTGCAGTGGGAGCTCATAAGGTTTTTGAATGCTGGCATATTTGGCAATGGCACAGAGACCTGCCAAACCCTGCCTCACACAGCCACAAGAGCAGCCATGTTGGTCAGAATCAACACTCTTCTTCAAGGATACTCAGGCATCAGATTTGAGATCCTGGAAGCCATAACCAAGTTTCTGAACCACAACATAACCCCATGCCTTCCTCTGAGAGGCACAATCACTGCCTCAGGTGACCTGGTCCCTCTGTCCTACGTTGCTGGCCTCTTGATAGGCAGACCCAACTCTAAATCCGTAGGGCCTGATGGGAAAATTCTCTCTGCTAAACAGGCCTTTGAGCTTGCTGGAATTGACGGGGGCTTCTTTGAATTACAACCCAAAGAGGGTCTGGCTCTTGTTAATGGCACTGCAGTGGGATCAGGGTTAGCTTCCATGGTCCTCTTTGAGGCCAACATTCTAGCTGTTCTCTCTGAGGTGTTGTCTGCAATTTTTGCTGAGGTTATGCAGGGAAAACCGGAGTTCACAGACCACTTGACACATAAACTGAAACATCATCCTGGCCAGATTGAGGCTGCAGCTATAATGGAACACATTTTAGATGGAAGTTCTTACGTTAAAGCAGCACAGAAGCTTCACGAGATTGATCCTCTTCAGAAGCCTAAACAAGACAGATACGCTCTGAGAACATCTCCCCAGTGGCTTGGTCCTCAGATTGAAGTTATTAGACAAGCGACCAAGATGATCGAGAGGGAGATAAACTCCGTGAACGACAACCCACTGATTGACGTTTCAAGAAACAAGGCACTTCATGGAGGGAACTTCCAAGGTACCCCCATTGGTGTTTCAATGGACAACACACGTTTGGCTCTTGCTTCGGTTGGGAAACTCATGTTTGCTCAATTCTCTGAGCTTGTCAACGACTTCTACAACAACGGGTTGCCTTCGAATCTCACGGCCAGCCGAAACCCGAGCTTGGATTACGGCTTCAAAGGAGCCGAAATCGCCATGGCTTCCTACTGCTCAGAGCTTCAGTTCCTTGCAAACCCTGTCACCAACCATGTCCAGAGTGCAGAGCAACACAATCAAGATGTTAACTCTTTAGGGTTAATCTCCTCCAGAAAAACAGCAGAAGCTGTGGAGATTCTGAAGCTCATGTCCTCCACTTTCCTAGTTGCATTATGCCAAGCCATTGATCTGAGGCATCTGGAGGAAAACTTAAAGCACACAGTCAAGAACACTGTAAGCCAGGTGGCCAAGAAGGTCTTAACAGTAGGCATCAATGGTGAATTACACCCTTCAAGATTCTGTGAAAAAAACTTACTCAAAGTTGTTGATCGTGAACATGTGTTTGCCTACATTGATGATCCATGCAGTGCAACATACCCATTAATGCAGAAACTGAGACAGGTCCTGGTTGATCATGCTCTAGAAAATGGTGAAAGAGAGAAGAACTCTAGCACCTCCATCTTCATGAAAATTGCAGCTTTTGAGGAAGAGCTCAAGACCCTCTTGCCCAAGGAGGTGGAGAGTGCAAGGATTGAGGTTGAGAATGGAAACTCTGCAATTCCCAACAGAATCAAAGAATGCAGGTCATACCCATTGTACAGATTTGTGAGAGAAGAAGTGGGTACTGATTTGCTCACAGGTGAGAAAGTTAGGTCACCTGGGGAAGAATTTGATAAAGTGTTCTCTGCAATGTGTGAAGGCAAGTTGATTGATCCTCTTTTGGAGTGTCTCAAGGAGTGGAATGGTGCTCCTCTACCACTATGTTAG 2160 0.4921 MEFPKANGEYINGANAMELCNGVGGSKDPLNWGMAAEALKGSHLEEVKRMVEEYRRPVVRLAGKSLTISQVAAIAGHDTGVAVQLSEEARAAVNASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQWELIRFLNAGIFGNGTETCQTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSVGPDGKILSAKQAFELAGIDGGFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRQATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASVGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGINGELHPSRFCEKNLLKVVDREHVFAYIDDPCSATYPLMQKLRQVLVDHALENGEREKNSSTSIFMKIAAFEEELKTLLPKEVESARIEVENGNSAIPNRIKECRSYPLYRFVREEVGTDLLTGEKVRSPGEEFDKVFSAMCEGKLIDPLLECLKEWNGAPLPLC 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2784 719 FunFam Phenylalanine ammonia-lyase 532 653 - -
Bisa03g2784 719 Gene3D - 532 653 IPR023144 -
Bisa03g2784 719 SUPERFAMILY L-aspartase-like 28 719 IPR008948 GO:0003824
Bisa03g2784 719 FunFam Phenylalanine ammonia-lyase 266 573 - -
Bisa03g2784 719 Gene3D Fumarase/aspartase (Central domain) 266 714 - -
Bisa03g2784 719 CDD PAL-HAL 64 529 IPR001106 -
Bisa03g2784 719 PANTHER HISTIDINE AMMONIA-LYASE 25 719 IPR001106 -
Bisa03g2784 719 NCBIfam phenylalanine ammonia-lyase 28 709 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bisa03g2784 719 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 201 217 IPR022313 GO:0016841
Bisa03g2784 719 Pfam Aromatic amino acid lyase 66 540 IPR001106 -
Bisa03g2784 719 Gene3D - 20 265 IPR024083 -
Bisa03g2784 719 FunFam Phenylalanine ammonia-lyase 19 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2784 Bisa-ChrBisa03 44104270 44107806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2784 28 719 Monolignol Biosynthesis Gene Families AT3G53260 84.682 0.0 1246