Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2702 ATGGCTTCTAGCAGCAACCCTCACGGCGCTGCTTCTTCTGCCTACAGAGGCGTCCGCAAGAGAAAATGGGGCAAGTGGGTATCCGAGATCCGGGAACCAGGCTCCAAGACCCGGATCTGGCTGGGCAGCTTTGACACCGAGCAGATGGCCGCCGCCGCCTACGACGTTGCCGCTCTCCACTTCCGGGGCAGCAAGGCGCGGCTCAACTTTCCGGGCCTCGCTGCCACACTCCCCCGGCCGGCGAGCAACAATGCAGACGACATACGGGCCGCGGCCCATGAAGGGGCGAGGTTGGCGGCGATGAGGACCGACCAGGGTGGCGGTGGGCCGGTGACGGTGGGGTTGTCGGCGAGCGAGATTCAGGCGATCAGTGAGTCGCCGATGTGGATGCAAACGTCGGAGACGGAGGAGGAGCAACATATGATGTTTGGGAATGAGCTTGAGGACAATGAGTGGGAGAATCTGCAAAGTGATTCTCTTTGGGATCCTTAG 492 0.6179 MASSSNPHGAASSAYRGVRKRKWGKWVSEIREPGSKTRIWLGSFDTEQMAAAAYDVAALHFRGSKARLNFPGLAATLPRPASNNADDIRAAAHEGARLAAMRTDQGGGGPVTVGLSASEIQAISESPMWMQTSETEEEQHMMFGNELEDNEWENLQSDSLWDP 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2702 163 Gene3D AP2/ERF domain 14 72 IPR036955 GO:0003700|GO:0006355
Bisa03g2702 163 MobiDBLite consensus disorder prediction 1 20 - -
Bisa03g2702 163 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 140 - -
Bisa03g2702 163 CDD AP2 13 71 IPR001471 GO:0003700|GO:0006355
Bisa03g2702 163 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Bisa03g2702 163 PRINTS Ethylene responsive element binding protein signature 53 73 IPR001471 GO:0003700|GO:0006355
Bisa03g2702 163 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Bisa03g2702 163 FunFam Ethylene-responsive transcription factor 2 13 72 - -
Bisa03g2702 163 Pfam AP2 domain 14 63 IPR001471 GO:0003700|GO:0006355
Bisa03g2702 163 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
Bisa03g2702 163 SUPERFAMILY DNA-binding domain 13 71 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2702 Bisa-ChrBisa03 42251582 42252073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2702 13 163 AP2-EREBP Transcription Factor Family AT1G71450 56.790 4.93e-57 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g2702 AP2 1.4e-13 CL0081